New model in OGS2.0 | DPOGS213061  |
---|---|
Genomic Position | scaffold2500:- 11971-15657 |
See gene structure | |
CDS Length | 858 |
Paired RNAseq reads   | 2001 |
Single RNAseq reads   | 6407 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007678 (3e-118) |
Best Drosophila hit   | obstructor-B (2e-79) |
Best Human hit | ND |
Best NR hit (blastp)   | AGAP009790-PA [Anopheles gambiae str. PEST] (9e-104) |
Best NR hit (blastx)   | cuticular protein analogous to peritrophins 3-B [Tribolium castaneum] (6e-105) |
GeneOntology terms    | GO:0016490 structural constituent of peritrophic membrane GO:0008061 chitin binding GO:0005576 extracellular region GO:0006030 chitin metabolic process |
InterPro families   | IPR002557 Chitin binding domain |
Orthology group | MCL17053 |
Nucleotide sequence:
ATGGCGCTCAAATCGTTAGCAGTTCTGGCGTGCCTAATAGTGTTAGCTTCATCAGCGGTA
CCAAAAAAGGGTCGGAAACCAGCCAACCCTCCCGCACGAGTCGCCGATGACTCGGAGACA
GACGCTGAGATCACCAGCTCCTGTCCTGATGATGGATTCTTTGCTGACGCAGAACAGTGT
GACAAATACTACGAGTGCAGAAATGGTCAAATAATCGAAAAACTGTGTCCCGATGGTATG
GTCTTCAACGACTACAGTCCCGAAGAGGAAAAGTGTGATCTGCCGTTCAATATTGACTGT
TCACAAAGACCCAAATTACAGGAGCCAATTCCCGCTGAGCACTGTGTACGTCAAAATGGT
TACTTCTCCCACGAGGATCCTAAGGAGTGTGGAAAGTTCTATTACTGCGTGGACGGCAAG
TTTAACGCCATCACTTGTCCTGAAGGTCTCGTCTATAATGACAAGTCTGGAATCTGTACT
TGGGCAGATGAGGCAAAGAAGAAGGGCTGTGGCGCTGCTGATGTTTTCAAATTCGAGTGC
CCCGCTGTGAATGAGACATTCGCCCTCACTCACCCTCGATACGCTGATCCTGATGACTGT
CAGTTCTTCTACGTGTGCATCAATGGAAACACCCCGAGACGGTCAGGTTGCAAGCTTGGT
CAAGCCTTCGATGATGTTAGCAAGAAATGCGAATGGGCCAGGAGGGTTCCTGAATGCGCC
GACTGGTACAAGGGTCAGCTAACAGATGCTGAGCTCGATGCCCTAGAGAACCCTCCTACG
CCCAAACCTAAACCGTCAGGCTCCTCATCGCGCCGCAAACCTATGAGACCCAGCAAAGGA
AAACAAATTGAAGAATAA
Protein sequence:
MALKSLAVLACLIVLASSAVPKKGRKPANPPARVADDSETDAEITSSCPDDGFFADAEQC
DKYYECRNGQIIEKLCPDGMVFNDYSPEEEKCDLPFNIDCSQRPKLQEPIPAEHCVRQNG
YFSHEDPKECGKFYYCVDGKFNAITCPEGLVYNDKSGICTWADEAKKKGCGAADVFKFEC
PAVNETFALTHPRYADPDDCQFFYVCINGNTPRRSGCKLGQAFDDVSKKCEWARRVPECA
DWYKGQLTDAELDALENPPTPKPKPSGSSSRRKPMRPSKGKQIEE