| New model in OGS2.0 | DPOGS213142 |
|---|---|
| Genomic Position | scaffold2500:+ 593-9752 |
| See gene structure | |
| CDS Length | 786 |
| Paired RNAseq reads | 1704 |
| Single RNAseq reads | 4189 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007901 (1e-102) |
| Best Drosophila hit | peritrophin A, isoform B (5e-85) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein analogous to peritrophins 3-D1 [Tribolium castaneum] (1e-95) |
| Best NR hit (blastx) | cuticular protein analogous to peritrophins 3-D1 [Tribolium castaneum] (4e-104) |
| GeneOntology terms | GO:0016490 structural constituent of peritrophic membrane GO:0008061 chitin binding GO:0005576 extracellular region GO:0006030 chitin metabolic process |
| InterPro families | IPR002557 Chitin binding domain |
| Orthology group | MCL15209 |
Nucleotide sequence:
ATGTCCACATTCAACAGTATTACAGATAGCGCGGTCGTTGGTAGCGGTTCGGTCCGCACG
CGCCAGTGCTGCCGGCCGTGGTTACAAGCGCGGACGTCCAAAATGATAAGTTCCGTATTT
GCTGTTTTAACACTTTGCGTTGTATACGCGCACGCAGGGATCCTTCTTCCACATGCTCCA
ACCTGTCCGGAGCACTATGGAGTTCAGGCATATGCCCACCCCGAGTTATGTGATCAATTC
TTTTTGTGCACAAACGGCACACTAACCGTCGAAACATGCGAGAACGGCCTTCTGTTTGAC
GGCAAGGGCGCAGTACACAATCATTGCAACTACCACTGGGCCGTCGACTGCGGTGAAAGG
AAAGCTGACTTGACACCATACTCTACTCCTGGTTGCGAATACCAGTTCGGTATATACCCA
GATAGCGCTGAATGTTCAACAAGCTACATTAAATGCGCTTTCGGCATCCCCCATCAAGAA
CCTTGCACCCCTGGTCTAGTATACGACGAGCGTATCCATGGTTGCAACTGGCCTGATCTC
CTGCAACCTTTCTGTAACCCTGAAGCTGTCGTTGGCTTCAAGTGTCCAACTAAAGTTCCC
GCCAATACCCAGTCAGCCAAGTTCTGGCCTTTCCCTCGTTTCCCGGTGCCCGGAGACTGC
CACAGACTGATCACATGCGTAGAGGGAAACCCTCGACTGATCACCTGCGGAGAAGGAAAA
GTTTTCGACGACCAGAACCTCACTTGTGAAGATCCCGAATTAGTGCCACACTGTGCACAC
GCTTAA
Protein sequence:
MSTFNSITDSAVVGSGSVRTRQCCRPWLQARTSKMISSVFAVLTLCVVYAHAGILLPHAP
TCPEHYGVQAYAHPELCDQFFLCTNGTLTVETCENGLLFDGKGAVHNHCNYHWAVDCGER
KADLTPYSTPGCEYQFGIYPDSAECSTSYIKCAFGIPHQEPCTPGLVYDERIHGCNWPDL
LQPFCNPEAVVGFKCPTKVPANTQSAKFWPFPRFPVPGDCHRLITCVEGNPRLITCGEGK
VFDDQNLTCEDPELVPHCAHA