| New model in OGS2.0 | DPOGS215779 |
|---|---|
| Genomic Position | scaffold2955:- 13586-17082 |
| See gene structure | |
| CDS Length | 1371 |
| Paired RNAseq reads | 735 |
| Single RNAseq reads | 1707 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003655 (0.0) |
| Best Drosophila hit | ND |
| Best Human hit | mitochondrial enolase superfamily member 1 isoform rTSbeta (6e-146) |
| Best NR hit (blastp) | PREDICTED: similar to mandelate racemase [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to mandelate racemase [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0016853 isomerase activity GO:0005739 mitochondrion GO:0009063 cellular amino acid catabolic process GO:0046872 metal ion binding |
| InterPro families | IPR001354 Mandelate racemase/muconate lactonizing enzyme IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal |
| Orthology group | MCL17171 |
Nucleotide sequence:
ATGCCCTTGTCACGGCACGGTCTCAATATAGTTGACATCGACGTCCAGGATGTGAGGTTC
CCAACTTCTCTGGGAGGCCACGGTTCCGATGCGCTTCACACCGATCCAAACTACTCGTGT
GCGTACGTCATTACCAGTACTGAGAATGGCCAGCAGGGTTATGGTCTAACGTTCACCTGC
GGCCGAGGAACGGAGATTATAGTGCTCACCATACGGTCCATGAAGAAGTTTATACTGGGA
CGCAACGCCGCTGACATATTTGCAAATTTCTCTGAATTTTGGCGGATTATAACAAATGAT
TCACAGATGAGATGGCTTGGTCCTGAAAAAGGGGTAGTGCACTTAGCTGTGGCAGCAATT
CTGAATTCACTATGGGATTTGTGGGCTAGACTGGAGAAGAAACCGCTGTGGAAACTTTTA
GCGGATTTAACGCCAGAGGAACTTGTATCCACAATTGATTTTCGATACATAACCGACGTA
ATAACTAAAGAAGAGGCTGTCGAAATTTTAAAATCAAAACAAAATGGTAAAAATGAGAGA
GAAAGAATACTAAAAGAGAAAGGTTATCCAGCGTACACAACTCAAGTAGGTTGGCTGGGA
TACAGCGATGAATTCGTAAAGGAACAGTGTAAAAAATATTTAGATCTGGGTTTTACACAT
TTCAAAGTAAAAGTTGGTCGTGATGTTAAGGATGACTACAAACGATGCAGCCTGGTTCGC
AAGTACATAGGAGATGATAAATTTTTGATGGTAGACGCAAATCAGGCTTGGAGTGTGGAA
GAGGCGATAGAATGGATGAAAAAATTGGCACCACTAAAACCCATGTGGATCGAAGAACCA
ACATCTCCGGACGATATCTTGGGACACGCTGCCATTTCCAAAGCTTTACAGCCCTATAAC
ATTGGTGTTGCCACAGGAGAGATGTGTGCAAACCGAGTGATATTCAAACAGCTGTTACAG
AGCAATGGTATGCAGTATTGCCAGATTGATTCGGCTAGAGTAGGGGGCATCAATGAGATA
TTAGCGATCTACCTTATGGCCTACAAATTTAATGTGAAAGTGTGTCCGCACGCCGGCGGG
GTGGGTTTATGCGAGATGGTGCAACACCTCCAGGCCTGGGACTTCGTGAGTCTATCGGGC
TCTATGGAGGGCCGCCTCATAGAGTACGTCGACCAACAACACGAACACTTCTACGATCCT
TGTATAGTTGAGAAAGCGAGATATATCACACCGAAGCAACCCGGATACAGTACGCAGTTT
TTGCCGGAAACACTGAAAAAATTCGCTTACCCACACGGCAGTGAATGGAAGAGGATGATA
GATGAAGGGATGTTCCCGAAGCCGGATGAAGCTGAACTCGTCAACGGTTAA
Protein sequence:
MPLSRHGLNIVDIDVQDVRFPTSLGGHGSDALHTDPNYSCAYVITSTENGQQGYGLTFTC
GRGTEIIVLTIRSMKKFILGRNAADIFANFSEFWRIITNDSQMRWLGPEKGVVHLAVAAI
LNSLWDLWARLEKKPLWKLLADLTPEELVSTIDFRYITDVITKEEAVEILKSKQNGKNER
ERILKEKGYPAYTTQVGWLGYSDEFVKEQCKKYLDLGFTHFKVKVGRDVKDDYKRCSLVR
KYIGDDKFLMVDANQAWSVEEAIEWMKKLAPLKPMWIEEPTSPDDILGHAAISKALQPYN
IGVATGEMCANRVIFKQLLQSNGMQYCQIDSARVGGINEILAIYLMAYKFNVKVCPHAGG
VGLCEMVQHLQAWDFVSLSGSMEGRLIEYVDQQHEHFYDPCIVEKARYITPKQPGYSTQF
LPETLKKFAYPHGSEWKRMIDEGMFPKPDEAELVNG