| New model in OGS2.0 | DPOGS210320 |
|---|---|
| Genomic Position | scaffold2217:- 14940-20066 |
| See gene structure | |
| CDS Length | 1434 |
| Paired RNAseq reads | 6 |
| Single RNAseq reads | 40 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004216 (3e-68) |
| Best Drosophila hit | CG10804, isoform C (9e-141) |
| Best Human hit | sodium-dependent neutral amino acid transporter B(0)AT1 (4e-75) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC003133 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC003133 [Tribolium castaneum] (9e-178) |
| GeneOntology terms | GO:0005328 neurotransmitter:sodium symporter activity GO:0005887 integral to plasma membrane GO:0006836 neurotransmitter transport GO:0005326 neurotransmitter transporter activity |
| InterPro families | IPR000175 Sodium:neurotransmitter symporter |
| Orthology group | MCL11225 |
Nucleotide sequence:
ATGTGTATGATCAAAGGCATAGCGTCTTCTGGGAAAGTTGTCTACGTCACAGCCACCTTC
CCATATATAGTTCTGGTTATATTTTTCTTCAGAGGGATAACTTTGAAAGGAATGGGAGAT
GGGCTCGTTCATCTCTTTACGCCAAAATGGCATAAAATCCTAGATCCAGTTGTCTGGTTG
GAAGCGGGCACCCAAATTTTCTTCTCCTTGGGCCTCGCTTTCGGAGGCCTTATCGCATTC
AGCTCATACAACCCGGTGGACAATAACTGCTACAGAGATGCGATCATGGTCTCAATGACG
AACTGTCTAACGTCCATGTTCGCTGGCATTGTTGTTTTCTCCATCATCGGTTTTAAAGCA
ACTATGGTTTATGAGAAATGTTTGGCCATACGAAATGAGACCCTCCTTGAAGTGTTTGGT
CCTGAGTATACTAGAATGTCGTTTCCCGAAGCCGGTCAAAAATTGGCCGTCATGCTGAAC
GATACTGTAACCAATTTTATTATGCCACATCTTCCGGAATGCGATCTCCAGAAAGAGCTG
GACAACACTGCATCGGGCACTGGTCTAGCCTTCATAATATTTACGGAGGCCATCAACCAG
TTCCCTGGAGCTCAGTTCTGGTCCGTGCTGTTCTTCTTGATGCTGTTCACTCTCGGCATC
GACTCGCAGTTCGGGACGCTGGAAGGCGTGGTTACCAGTATTGTTGATATGAAACTGTTT
CCAAATCTTCGCAAGGAGTACCTCACTGGAGGTCTATGTCTGATCTGCTGTTTATTGTCT
ATGGGTTTCGCTCATGGCTCTGGGAGCTATATATTCCTGCTCTTTGACATGTACAGTGGA
AACTTCCCGCTACTGATCATCGCTTTCTGTGAATGTATTGGGATAGCATACGTCTATGGC
GTGAAGAGGTTGGGAGGTGGTGGTGGCCTGGAGGTTAAAGGACTGCCTCTCGTGCATGAG
GGCGCGGGTTCGAAACCTGACAAATTCGCGGATGACATAGAGCTGATGACGGGTCAACGT
CCCGGGATATATTGGTTGATATGCTGGAAGTATCTCTCGCCTCTGGCGATGCTGTCCATA
CTGATATCCTCGTTCGCGGAGCTGATCATGGAAGGTTCGAGCTACGAAGCTTGGATCAGC
TCCGAAGGCGATACTGTGAAGAAGCCCTGGCCTCTGTGGGCTGTTTTGTTGGTGTTGGTG
ATGGTGCTGGCTTCGGTACTTTGGATACCAGGACTGGCGATTTGCAGATATTTGGGTATC
CAGGTTATAGATGATGAGGAGCGCGCGTGGTTCCCGGCCGAGGAGTTACGTGATTTCCAC
GGCTTGGAGCCGAGGCCTGTCTCCGCGTTGGAGACGCTGCTGTTCTGTACACGACCGGAC
GGCAGTGAGAAGTGCTGTTGGCCGGGGTGCTGCGATACCGACGACGAGGAATAG
Protein sequence:
MCMIKGIASSGKVVYVTATFPYIVLVIFFFRGITLKGMGDGLVHLFTPKWHKILDPVVWL
EAGTQIFFSLGLAFGGLIAFSSYNPVDNNCYRDAIMVSMTNCLTSMFAGIVVFSIIGFKA
TMVYEKCLAIRNETLLEVFGPEYTRMSFPEAGQKLAVMLNDTVTNFIMPHLPECDLQKEL
DNTASGTGLAFIIFTEAINQFPGAQFWSVLFFLMLFTLGIDSQFGTLEGVVTSIVDMKLF
PNLRKEYLTGGLCLICCLLSMGFAHGSGSYIFLLFDMYSGNFPLLIIAFCECIGIAYVYG
VKRLGGGGGLEVKGLPLVHEGAGSKPDKFADDIELMTGQRPGIYWLICWKYLSPLAMLSI
LISSFAELIMEGSSYEAWISSEGDTVKKPWPLWAVLLVLVMVLASVLWIPGLAICRYLGI
QVIDDEERAWFPAEELRDFHGLEPRPVSALETLLFCTRPDGSEKCCWPGCCDTDDEE