| New model in OGS2.0 | DPOGS200680 |
|---|---|
| Genomic Position | scaffold364:- 60220-62326 |
| See gene structure | |
| CDS Length | 1785 |
| Paired RNAseq reads | 683 |
| Single RNAseq reads | 1498 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005552 (2e-110) |
| Best Drosophila hit | CG12301 (1e-12) |
| Best Human hit | U3 small nucleolar RNA-associated protein 14 homolog A isoform 1 (1e-14) |
| Best NR hit (blastp) | PREDICTED: similar to smooth muscle caldesmon, putative [Tribolium castaneum] (8e-106) |
| Best NR hit (blastx) | PREDICTED: similar to smooth muscle caldesmon, putative [Tribolium castaneum] (1e-69) |
| GeneOntology terms | GO:0005730 nucleolus GO:0005634 nucleus GO:0006364 rRNA processing GO:0032040 small-subunit processome |
| InterPro families | IPR006709 Small-subunit processome, Utp14 |
| Orthology group | MCL11683 |
Nucleotide sequence:
ATGAGTTATGAAGAAATGGTTGAACACAGACAGCATCTTGCTAAGTTTAGAGCTCAACAG
TCTTATAGGGCTGCCAAGGCTAAGAGACAAAGCAAAATTAAAAGTAAAAAATATCATCGT
ATACTTAAGAAAGAAAAATTAAAACAACAGTTAAAGGAATTTGAGGAATTACAAGCAACT
AATCCAGAAGAGGCATTGAAAAAACTTGAGGAGTTAGAAAAAGCACGAGCTTTAGAAAGA
CATACCTTGAGACATAAAAACACTGGAAAATGGGCTAAGAACAAATTAGTTAGAGCAAAA
TATGATAAAGAGGTGAGGCAGCAATTAGCTGAACAACTGTCCGTAAGCAGAGGTCTTACA
CAGAAAACACAAAATGTTGAAAGTTCAGATGATGAGCCAGATGAAAGTGAAAACATCTGT
GACATTCAAATATCACAGGATCCCATGAATCCATGGATGTTAAAGAAATCCGACAAGAGT
AATATAGATGCCGAATTCAATTTCGGCTATAAAAAATATTTAAAAGACAAAATGTATAAA
TGCAAAGAGCAAAGTGACTCGGAAGAAGATGAAGCTGACCAAAATAGAGACAACGACATG
AGTTCTCTGAAAATGCTGGCAGAGAGCTTGAAAAAATTAAACAATGGTGAAAGTACAAAT
GTGCTTGAAAACAAAACTCAAGACGATGTCACTTTAATGGATGTTACCAGTGAAGAAAAT
AAATCACTAACAGTTCTTAATAAAAATATTACACAGAAACAGAAAAGTAATAATACTGGC
AGAAAAAACAAAAGAAAGATAGTCTCAACCTCAGACTGGCTTGTGGAAGAAATAAATCCC
AAAAATGCAACAACTGAAGAAGATATAAATACTGCATTTGATGATTATGAAGACAAAGTA
GCATTAAAGGTTGCTAAAAAACTTAAGGGTTTGAAACATGAGTTAAAAAATTTAGAATCA
TCATCTATCAAGCCAAATAAAAAGACAAATGAAACTAGTAAAGAAATTGACAACCTTGAA
TATTTAAAAATTAAAAAGCAGAAACAGATGCCTATAATTGATGAACCTCTTATAGAATCA
AATAAAAATATTGATGACATACCCGAGCAGACAAAACACTTATTAGACACATTAAAAGAT
ACAATAACAAGCACAAGCCAAAACGTAAACACAGATATTGATCCAAGTAGGTTTATTGAA
GTTAAACCAAAGTATTTGAATACAGCTGTGACAAATTCCGAGAATAATTTCGACGACTTA
GATGATGAAGAACAAGTGGTACCCAAAGTGGATATTGAAGAAGTTTTTGAAGAAGACGAT
GTGGTGACTAGTTTCAGACAAGAGAAGGAGGACGAAATTAATAAGAATAATCCAGAAGAA
CTAAGTTTAACACTCCCTGGATGGGGAGGCTGGGCCGGTAAAGGTGTGAAAGCACCTAAA
CGAAAGAAAAATAGATTTATTACAAAGAAACCACCAAAAACACTCAGAAGAGATGAAAAC
AAAGGTGATGTAATCATTAACGAGTCTAAAAATCCCAAGCTTGCTATACATAAAGTTTCA
GATTTACCACATCCATTCAACAGTGTGAAAGAATATGAGGAAAGTATAAGAACGCCTCTA
GGTAACACATTTGTGCCTGAAACAGCTCATAAGAAACTTATAAAACCTAATGTTATCACA
AGATCTGGAACAATCATTGAACCGATGGATGAAGAAGAACTGCTTGTGCCAAGAAATCGT
AACTTTAAAAATAAGTCTGTTATTAAGATTCTAGGCAAGCAATAA
Protein sequence:
MSYEEMVEHRQHLAKFRAQQSYRAAKAKRQSKIKSKKYHRILKKEKLKQQLKEFEELQAT
NPEEALKKLEELEKARALERHTLRHKNTGKWAKNKLVRAKYDKEVRQQLAEQLSVSRGLT
QKTQNVESSDDEPDESENICDIQISQDPMNPWMLKKSDKSNIDAEFNFGYKKYLKDKMYK
CKEQSDSEEDEADQNRDNDMSSLKMLAESLKKLNNGESTNVLENKTQDDVTLMDVTSEEN
KSLTVLNKNITQKQKSNNTGRKNKRKIVSTSDWLVEEINPKNATTEEDINTAFDDYEDKV
ALKVAKKLKGLKHELKNLESSSIKPNKKTNETSKEIDNLEYLKIKKQKQMPIIDEPLIES
NKNIDDIPEQTKHLLDTLKDTITSTSQNVNTDIDPSRFIEVKPKYLNTAVTNSENNFDDL
DDEEQVVPKVDIEEVFEEDDVVTSFRQEKEDEINKNNPEELSLTLPGWGGWAGKGVKAPK
RKKNRFITKKPPKTLRRDENKGDVIINESKNPKLAIHKVSDLPHPFNSVKEYEESIRTPL
GNTFVPETAHKKLIKPNVITRSGTIIEPMDEEELLVPRNRNFKNKSVIKILGKQ