| Genomic Position | scaffold1579:- 22392-26014 |
|---|---|
| See gene structure | |
| CDS Length | 285 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 233 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012223 (4e-10) |
| Best Drosophila hit | CG3499 (4e-19) |
| Best Human hit | ATP-dependent zinc metalloprotease YME1L1 isoform 1 (1e-11) |
| Best NR hit (blastp) | PREDICTED: similar to GA17483-PA [Tribolium castaneum] (2e-19) |
| Best NR hit (blastx) | PREDICTED: similar to GA17483-PA [Tribolium castaneum] (1e-17) |
| GeneOntology terms | GO:0004176 ATP-dependent peptidase activity GO:0005743 mitochondrial inner membrane GO:0004222 metalloendopeptidase activity GO:0005524 ATP binding GO:0006508 proteolysis GO:0030163 protein catabolic process |
| InterPro families | IPR003959 ATPase, AAA-type, core IPR003960 ATPase, AAA-type, conserved site |
| Orthology group | ND |
Nucleotide sequence:
ATGTATCTTTGGAATACTCTCACCGTCTTTGGATATTGGGTATTGAAGTATCCTAGAAAC
TTAACTTTGGCTGGTTCATTGAGTCTAAAGCTAAGACATTTGAAAGGAAATTTGGAGTAC
TTGCAAAAATGGCTGCAGTACTTTACGTCGACAATAAACCAGCTCTTATCAGAGATGGAT
GGATTCCATCAGAACGAGGGTGTGATAGTGCTGGGCGCCACCAACAGGAGAGACGACCTG
GACCAGGCCCTGCTGAGACCTGGAAGATTCGATGTCGAAGTATGA
Protein sequence:
MYLWNTLTVFGYWVLKYPRNLTLAGSLSLKLRHLKGNLEYLQKWLQYFTSTINQLLSEMD
GFHQNEGVIVLGATNRRDDLDQALLRPGRFDVEV