New model in OGS2.0 | DPOGS208718  |
---|---|
Genomic Position | scaffold2153:- 145-1827 |
See gene structure | |
CDS Length | 1029 |
Paired RNAseq reads   | 691 |
Single RNAseq reads   | 1443 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003365 (3e-166) |
Best Drosophila hit   | lethal (1) G0095 (5e-34) |
Best Human hit | integrator complex subunit 4 (1e-52) |
Best NR hit (blastp)   | PREDICTED: similar to Integrator complex subunit 4 (Int4) [Tribolium castaneum] (2e-89) |
Best NR hit (blastx)   | PREDICTED: similar to Integrator complex subunit 4 (Int4) [Tribolium castaneum] (1e-86) |
GeneOntology terms    | GO:0032039 integrator complex GO:0005634 nucleus GO:0005515 protein binding GO:0016180 snRNA processing |
InterPro families    | IPR011989 Armadillo-like helical IPR016024 Armadillo-type fold |
Orthology group | MCL12418 |
Nucleotide sequence:
ATGGCTGCAGTTCTCAAAAAGAGGGCCTTAGCGGAATACAATAAATCATTCCAGCAGGAT
GGTCCATCGTCGAAAAAGTTACATCTAGCCAAAAAACCGCTTATAGGTAGTTCAGCTGCA
GCTTTCGTGGGACTGCTAGAGAAATGTAAATCTAGTGATGAGGCATTACAGTTACTATTA
CGCATCTCAGATTGCCTACAGTTCCAAGAATCAGATGTCGAGGAAGCCATCAAGAAGCTA
TCAGAACATTTTCAATCTGAAGAGGAGTCAGTGGTCAGGGTTAAAATACTCTGGCTCTTC
TGTGATATAGGTCTAGAATGCCCCGGAGCTAATTTGAATAACTTGATTGATGAGACCATA
CATTTAATTAAAAATGAAACATCACATAAGGTGATAGCACAAGGTATAGCGACATTACTT
AAACTTGGTACCAAGCTTAGTGACGATAAGATTCTCATGATGAGGCTTGTCGGTGTAGCC
AGAGACAATCTCAAGGATACCAGCCACCAAGTGAAATGTAAATGTCTGCAGTTGATAAGT
GAACTCTACCCGATATATCCGGAGTCTGATAGAACAGTAGAAATGACGGCAGAGGCTGAT
ACTATTGTCAAGTTGCTCGGGGACTACAGTAATGCCGAGGATGCGAGAGTGAGATGTGAG
GCATTTCAGTCACTCTTGACGTTGCATGAGAGAGGTCAAACATTAAGTGCTAGTCTATAT
GAGCCAGTGTGTGCTGCACTCTCAGATGACTATGAGATAGTAAGGGAAGTAGCACTCAAA
CTGGTGTGGCTACTAGGAAATAAGTACCCAGAAAATTCAGTAACATTACAAGACGGAGAG
ACAACAATTCGTCTCGTAGATGATGCGTTTATTCGTATTTGTTCGGCTGTTAATGATCTG
TGTATGCAAGTACGAGCTCTGTCCTGTTCTCTGCTGGGCACAACAAGAGCTGTCTCCGAT
CGCTTCCTCTTGCAAACGTTGGATAAACAACTCATGAGTAACATGAAGGTTGGTACACTG
TTCTGTTAA
Protein sequence:
MAAVLKKRALAEYNKSFQQDGPSSKKLHLAKKPLIGSSAAAFVGLLEKCKSSDEALQLLL
RISDCLQFQESDVEEAIKKLSEHFQSEEESVVRVKILWLFCDIGLECPGANLNNLIDETI
HLIKNETSHKVIAQGIATLLKLGTKLSDDKILMMRLVGVARDNLKDTSHQVKCKCLQLIS
ELYPIYPESDRTVEMTAEADTIVKLLGDYSNAEDARVRCEAFQSLLTLHERGQTLSASLY
EPVCAALSDDYEIVREVALKLVWLLGNKYPENSVTLQDGETTIRLVDDAFIRICSAVNDL
CMQVRALSCSLLGTTRAVSDRFLLQTLDKQLMSNMKVGTLFC