| New model in OGS2.0 | DPOGS208719 |
|---|---|
| Genomic Position | scaffold2153:+ 2882-7596 |
| See gene structure | |
| CDS Length | 1743 |
| Paired RNAseq reads | 97 |
| Single RNAseq reads | 274 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003387 (1e-36) |
| Best Drosophila hit | CG7943, isoform A (7e-61) |
| Best Human hit | mitochondrial carrier triple repeat protein 1 (2e-41) |
| Best NR hit (blastp) | C-type lectin 17 [Bombyx mori] (3e-99) |
| Best NR hit (blastx) | C-type lectin 17 [Bombyx mori] (2e-98) |
| GeneOntology terms | GO:0022857 transmembrane transporter activity GO:0005740 mitochondrial envelope GO:0005488 binding GO:0016020 membrane GO:0055085 transmembrane transport |
| InterPro families | IPR001304 C-type lectin IPR018108 Mitochondrial substrate/solute carrier IPR023395 Mitochondrial carrier domain IPR016186 C-type lectin-like IPR016187 C-type lectin fold |
| Orthology group | MCL11143 |
Nucleotide sequence:
ATGTCAGATTTTAAAGGCAGCAATGAGAGTAAGGCAGCCCTAAAGGGATCAAACAACCTC
CAACACCAACATTGGAAAGAGTTTGTTTGTGGTGGAGGTTCTGCCTTCTGCAACATTCTC
ATTAGCTATCCCTTAAATAAAGTCATATTTAGACAGATGATGCATGGAGTCGAAGCTACA
TTTGCTCTCAACCAACTCCAAAAGGAAGGCTTGGGTTATTTATACCGTGGGATGTTGCCG
CCTCTGTTACAAAGATCTATGTCAATGTCTCTCATGTTTGGTATATATGATGAGTGTCTC
CAGCCTCTGTTACATTATAACGTGAACCCTCATCTCTCTAAGATGATAGCCGGAGTGGTC
GCTGGTTGTTTTGAAGCCACCCTCATGCCGTTTGAACGTCTCCAAACATTACTGATCCAT
CCAAAGTACCATCAAAAGTTCAAGAATACTGCGGACGCAGCCAGTAATATATATAAGCAC
TATGGAATCAAAGAGTTTTATAGAGGGCTCGTTCCAATTTTACTCAGGAACGGTCCATCG
AATGCTCTGTTTTTTGTCATTAGAGATGAGGTGCGTTTGAGATTGCCTAGTCAGGACAAA
TTAGTCTATGATAGCTTGCAGAATTTTCTAGCTGGTGCTTCAATCGGTGCTTTCCTAAGT
ACGCTATTTTATCCATTGAATGTTATAAAAATTGGCATGCAATGCGAGCTGGGCGGCCCT
CACAGGAAGCTGTTGTATGAGTTCAACTATATTCTGCGCAAGCGAGGTTCAAAGTTCGAG
CAGCTCAGTGAACTTATCACAGACTGTGAGCGGCCTAAGTTCCGGGTGGACTACAGATAC
GAGAAGGCTTTCAACACGTTTTATAAGTTACACCCCGAAGGCGTCAGTTGGCATCATTCG
CGTATACGTTGCGAGGCTGAGGGAACGGAATTGATGGTTCCCGATAATCTGGACGAAGCT
GACAGCATACCACTTCTAGTTGCTCCAATTCATAACAAATATCAAGGCGTCTACGTCGGT
ATACACGATTTGTATTCAGAAAGAACGTTCGTCACAATTAAAGGATATGAATTACAAAAT
ACTATTCTGGATTTACTGTGGGAATTGAGACAGCCGCAGCACAACGGAGGCCGGTGTGTC
GCGGCTCGTCGCAACGGTCGTTTGTTTGTCCATCCCTGTTCAGAACCGATGCCATTCGTT
TGTAAAATCAAAGCCTACAATATAACATACTATCCTGAATGTGACACTTTTGATTCTAGC
TGGAAGTTAGGACCGAATGGGACATGTTACTTAACACACACAGAGCCTCAAACGTGGTAC
GAGGCGTATTCGACCTGTTACGCTGCGGGCGGCCATCTTGCCATCATCGATTCCAAAGAA
GAAGGTGAATACATCCGCGACGTGTTCAAACAAGCCGAACAATCCATAGCTCCCAGCGAA
TTCGCATTCATTGGCTTTAGCGACTTGTTTCAGAGATACCATTATCGAACTGTTCTAGGA
AATCCATTAAGTAAGGATCAGATAGACTGGGACTTCAAATGTCCCGGAAATAATTCAAAA
GACGATGAACGTTGCGGAAGTTTGCGACGAAGCGGTCTTATAGCAACAAGCCGTTGTAAT
GTACCAGCCATGTTCTTTTGTGAGAAGCCAGCGGTTGGATCGTTTAGTATAAGAACTGGC
CTCCACTCTGAAATGGAAAAGGAACTGACACGTAGAAATCAATTTGACATTTATGACGTT
TAA
Protein sequence:
MSDFKGSNESKAALKGSNNLQHQHWKEFVCGGGSAFCNILISYPLNKVIFRQMMHGVEAT
FALNQLQKEGLGYLYRGMLPPLLQRSMSMSLMFGIYDECLQPLLHYNVNPHLSKMIAGVV
AGCFEATLMPFERLQTLLIHPKYHQKFKNTADAASNIYKHYGIKEFYRGLVPILLRNGPS
NALFFVIRDEVRLRLPSQDKLVYDSLQNFLAGASIGAFLSTLFYPLNVIKIGMQCELGGP
HRKLLYEFNYILRKRGSKFEQLSELITDCERPKFRVDYRYEKAFNTFYKLHPEGVSWHHS
RIRCEAEGTELMVPDNLDEADSIPLLVAPIHNKYQGVYVGIHDLYSERTFVTIKGYELQN
TILDLLWELRQPQHNGGRCVAARRNGRLFVHPCSEPMPFVCKIKAYNITYYPECDTFDSS
WKLGPNGTCYLTHTEPQTWYEAYSTCYAAGGHLAIIDSKEEGEYIRDVFKQAEQSIAPSE
FAFIGFSDLFQRYHYRTVLGNPLSKDQIDWDFKCPGNNSKDDERCGSLRRSGLIATSRCN
VPAMFFCEKPAVGSFSIRTGLHSEMEKELTRRNQFDIYDV