| New model in OGS2.0 | DPOGS208720 |
|---|---|
| Genomic Position | scaffold2153:+ 11337-14016 |
| See gene structure | |
| CDS Length | 948 |
| Paired RNAseq reads | 10 |
| Single RNAseq reads | 31 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000813 (3e-51) |
| Best Drosophila hit | CG2064 (1e-52) |
| Best Human hit | retinol dehydrogenase 11 (2e-57) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010879 [Tribolium castaneum] (2e-94) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010879 [Tribolium castaneum] (9e-89) |
| GeneOntology terms | GO:0003824 catalytic activity GO:0008152 metabolic process GO:0016491 oxidoreductase activity GO:0055114 oxidation reduction GO:0005488 binding GO:0005575 cellular_component |
| InterPro families | IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase |
| Orthology group | MCL11510 |
Nucleotide sequence:
ATGGGTTGGTTTAGTGGACGCTGTTATAGTGATGCAAAATTAAACGGTAAAACAATAATT
GTCACCGGATGCAACACCGGAATCGGCAAGGTTACCGTGGAGGAATTTTATAAAAGAGGA
GCAAAAGTTATCATGGCCTGTAGAGACGTTGGAAAGGCGGAGGAAGCTAAGATTGATATA
AAAGAAACTTGTAAAAATTCACCAAACAAAGGCGAACTCATCGTTGAAGAATGTGACTTA
TCCTCTTTTAAATCGATTAGAAATTTTAGTCAAAAGGTTCTCAAAAGTAAAACTGAAATT
AACGTTTTGGTGAACAACGCTGGAGTGATGATGGCCCCTCGAGGAGAGACGGAAGATGGT
TTTGAAACTCATTTCGGTACAAATCACCTCGGACATTTCCTCCTTACAATGCTTTTACTG
CCCAGGATAATTAAAAGCACCCCAGCAAGAATAGTTACTGTATCCTCTAAAGCACATTCG
TTGTTTAATTTACATTTGGAGGACCTGAACTATACACTAAGACCATATAATTCTGCTGAG
GCATATGCACAAAGTAAAATAGCAAATATTTTATTTTCGAGAGAACTATCCAAAAAACTC
AAGAGTTACAATATCCAAGGCATAAACACTTACAGCCTCCATCCGGGTTTAATTAAAACT
GATTTATATCGACATTTGAATAGCCCGATCAGAAGTTTAATAAGAACCATTGTCGTGGAT
TACATTTTCTATCCATTTTCGAAAACTATAGAAATGGGAGCTCAAACTACTATTTACTGC
GCTATAGATGAAAAATGTTCCAATGAGACCGGTCTTTATTACACTGACTGCACAGTGACG
TCACCAAGTACACATGCTCTAAATGATGAGAATGCAAAAAAATTGTGGGATATGTCGATG
GAAATGGTGGGATTAAAGGATTGTAATCCATTCACCTCCGTTTATTGA
Protein sequence:
MGWFSGRCYSDAKLNGKTIIVTGCNTGIGKVTVEEFYKRGAKVIMACRDVGKAEEAKIDI
KETCKNSPNKGELIVEECDLSSFKSIRNFSQKVLKSKTEINVLVNNAGVMMAPRGETEDG
FETHFGTNHLGHFLLTMLLLPRIIKSTPARIVTVSSKAHSLFNLHLEDLNYTLRPYNSAE
AYAQSKIANILFSRELSKKLKSYNIQGINTYSLHPGLIKTDLYRHLNSPIRSLIRTIVVD
YIFYPFSKTIEMGAQTTIYCAIDEKCSNETGLYYTDCTVTSPSTHALNDENAKKLWDMSM
EMVGLKDCNPFTSVY