| New model in OGS2.0 | DPOGS206526 |
|---|---|
| Genomic Position | scaffold1315:- 28090-32309 |
| See gene structure | |
| CDS Length | 699 |
| Paired RNAseq reads | 629 |
| Single RNAseq reads | 1876 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001342 (1e-105) |
| Best Drosophila hit | Big brother (3e-73) |
| Best Human hit | core-binding factor subunit beta isoform 2 (3e-44) |
| Best NR hit (blastp) | PREDICTED: similar to GA20722-PA [Tribolium castaneum] (1e-78) |
| Best NR hit (blastx) | PREDICTED: similar to GA20722-PA [Tribolium castaneum] (3e-79) |
| GeneOntology terms | GO:0005634 nucleus GO:0003713 transcription coactivator activity GO:0016513 core-binding factor complex GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0046982 protein heterodimerization activity GO:0008134 transcription factor binding |
| InterPro families | IPR003417 Core binding factor, beta subunit |
| Orthology group | MCL14017 |
Nucleotide sequence:
ATGGGCGACCCCGCTGCTCTTGCAGGAATGTTACCCTTCGACTCTATCGGATTGTACGAA
CAACCGAAACAGCGTTTTATATTTAAGATGCCGCGAGTTGTTCCCGATCAGAAGAGTAAA
TTTGAGACCGAGGATCTGTTTAAAAGACTTAGTAGAGAGAGCGAGGTGAGGTACACGGGG
TACCGAGATCGTCCGCCTGAAGAGCGTCAGATGAGGTTCACCAGCGGCTGCCGGGAGGGG
CACACGGAGATCGCCTTCACTGCCACAGGAACCAACTTACAGCTGGTGTTCGATCACTCG
CCGTACAACAACAGAGGATGCGACTTCCAAAAGGAAACCGGCAAGGCCCATATCGTGTCC
CGATTCATAATGAATGGAGTCTGTGTGAGGTGGCGGGGCTGGATCGATCTTGAACGTTTG
GATGGTGTCGGATGTCTGGAGTTGGATGAAGAACGCGCTGCCATCGAGGACGCAGCTTTA
CGAGACCAGATAGAAAGATACAACCAGAGACTGAGGGATTTCGAAGACAAGCAGCGGGCA
TATCGTGAACACGGCGAAGAACTGCGCGCGCATTCCCAAGTCCACGCTCAGCGCTGCCAC
CAGGCTCGCCAGCCTCCACACCCGACACATCCGGCACACCCCCACGCGACACATCCAGTC
CACATCAAACCACATTCCCAAGGTGCACTCATCTCGTAA
Protein sequence:
MGDPAALAGMLPFDSIGLYEQPKQRFIFKMPRVVPDQKSKFETEDLFKRLSRESEVRYTG
YRDRPPEERQMRFTSGCREGHTEIAFTATGTNLQLVFDHSPYNNRGCDFQKETGKAHIVS
RFIMNGVCVRWRGWIDLERLDGVGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRA
YREHGEELRAHSQVHAQRCHQARQPPHPTHPAHPHATHPVHIKPHSQGALIS