New model in OGS2.0 | DPOGS206528  |
---|---|
Genomic Position | scaffold1315:- 15099-20680 |
See gene structure | |
CDS Length | 2250 |
Paired RNAseq reads   | 804 |
Single RNAseq reads   | 2094 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005916 (0.0) |
Best Drosophila hit   | katanin 80, isoform A (2e-64) |
Best Human hit | katanin p80 WD40-containing subunit B1 (4e-95) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC014074 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC014074 [Tribolium castaneum] (8e-179) |
GeneOntology terms    | GO:0003674 molecular_function GO:0051301 cell division GO:0005874 microtubule GO:0005737 cytoplasm GO:0007049 cell cycle GO:0005856 cytoskeleton GO:0007067 mitosis |
InterPro families    | IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR020472 G-protein beta WD-40 repeat |
Orthology group | MCL13697 |
Nucleotide sequence:
ATGGAAACCTTAAGAAGATCATGGAAATTACAAGAATTTGTTGCCCACAAGGCAAACGTC
AACTGCTTGGCTATGGGACACAAATCAAATCAAGTCCTTGCTACTGGTGGAGATGACAAA
AAAGTTAATCTTTGGGCTATTGGTAGACAAGGGTGTTTAATGAGCCTTAGTGGTCACACA
ACTCCAGTAGAGTGTGTTTGCTTTGGTCACTCTGAGGACTTAGTTTGTGCTGGTTCTCAA
ACAGGTGCCTTAAAAATATGGGATTTGGAAGCTGCAAAATTATTAAGAACATTCACGGGA
CATAAAGGTGCTATTAAATGTATGGATTTCCACCCCTATGGGGATTATTTGACAACTGGA
TCATGTGACAGTAATATCAAACTATGGGATACGAGGAAAAGAGGTTGCATTGTTACATAT
TCAGGTCATAGACTTGCAGTGAACAGTCTACAATTCAGTCCAGATGGTCAATGGATAGCA
TCAGCCTGTGAAGATGGTTTGGTAAAAGTGTGGGATGTTCGGATTGGAAAGGTTTTACAA
GAGTTCATGGAGCACACTTCAGCTGTGACCTGTGTCAAGTTCCACCCACATGAATTCTTG
CTCGCCAGCTGCGGTGCTGACAAAACAGTAAATTTTTGGGACATGGAAAAATTCCAACTA
GTATCTAAATTTGAAAAAGAGAACACATCAATAAGGCACATGGTGTTCAGTGATGATGGA
GCTACGCTATTAGGATGTGGCAATGATGGGCTACATGTCATAGGATTTGAACCTGCTAGG
GTTTTGGACACAGTGAATGGACACTGGGGTCATATACATGACATAACAGTGGCACAGACA
CAACTTATCGCGGGTTCGTTTCATTCAACCTATGTTGTTTTATCTGTGGTTGATCTCAAC
AAAGTCCATCCCTTTGGAGGTCCGCCGCCAACTATTGTTAGAGACACCTCGCCATTCCAG
AAAGGACAGTCAGTTCGCAAGAGTTTTTCTAAAGAGAAACCGCCTAAAGAAGTCTTGCAT
AGACCAACACTCCTCGATGAGAGGACGGCAGAGGAATCGACTTCGGGGACGGAGGCAGAT
GAAGATTCAGGTGCTGTTATAGCTAATATTAATGACTACACTGAAATATTTCGTCCCTCT
AGAGCCTTGCCGCGTACACCGCCTCCGGCCACCAGTTTATCATCGGAGGATTTCTCATTG
AGTGGTCTAACAGGTGAAGATAACAATCTCGAATCGGGTGCAGCACTTCGGGACCTATCG
TTGACACGGCGGGACTACGGAACCGAAAACACTGTCTTTAGTACAGTACTGAAAAGCAAT
AAGGAAGAGAAGGTTTTCGCCTCCGCCCAGACATCTCTTGTAAAAGAATTCGCAACCAGC
CCACTAACAACCTCATCATTAAATAGACATAACTCATATAAAGAGACAAAATCATCAACT
GATATAACCTCGTCGAACCTGCGTCAGAGTAATAGCGAGGTATCTTTGGGACCGCCTTCT
CTCGCCGGTGCAAGAAATAGTAAGTGCAGACCCCCTAGTCAAATACCCAGATCCCGCGTG
GAGCCTCCGCCGCCTCGGTCTCCTGAAGATAGAGTGCCGGAGCCCGAGTTCGTGCCTTAC
TCCATCGACCGACCAGTCGGACTGGACTTGGATGAATTCCTACCTCGGGGTGCGTGTGCG
TCTGGCGTGGGTCGCGGCGCTCGAGGTCACGCTGCCGAGCCTAGTGAGCAGGAAGTGTTA
GGGGTCATGATGAGAGGACACGACTCCATGATGACGGTACTGGCCGCCAGACAAAGAGCT
CTACAGATATTTCACTCCGTCAGAATAAACAAAAGCCTAAAATCGGCACTGGACTCGGTG
ATCGCTTTAGAAGACGCGTCTGTGATACTCGACATTCTTAACGTGATGGCTCATAAACCG
TCTTTATGGAATTTGGACATATGTTTATTAATGTTGCCCAAGATTTACGAACTGCTGCAG
AGCAAATATGAATCGTATATGCAATGCGGGTGCAACGCTTTGAGACTAATAGTACGCAAC
TTCTCCTCTGTGGTGCGAGCTAACGTGAGCGCGCCAGTGAGGACCCTAGGTGTCGATATA
CCAAGGGAAGAAAGATACGCCAAATGCGCGCAAATACACAGACTGTTGCTAGACATACGA
GCGTTCCTTCTCAAAAGACAAACCCTACAAGGCCGACTCGGAGCTGCCTTCAGGGATCTC
CACACGCTGATGCAACAAGGACTTGACTGA
Protein sequence:
METLRRSWKLQEFVAHKANVNCLAMGHKSNQVLATGGDDKKVNLWAIGRQGCLMSLSGHT
TPVECVCFGHSEDLVCAGSQTGALKIWDLEAAKLLRTFTGHKGAIKCMDFHPYGDYLTTG
SCDSNIKLWDTRKRGCIVTYSGHRLAVNSLQFSPDGQWIASACEDGLVKVWDVRIGKVLQ
EFMEHTSAVTCVKFHPHEFLLASCGADKTVNFWDMEKFQLVSKFEKENTSIRHMVFSDDG
ATLLGCGNDGLHVIGFEPARVLDTVNGHWGHIHDITVAQTQLIAGSFHSTYVVLSVVDLN
KVHPFGGPPPTIVRDTSPFQKGQSVRKSFSKEKPPKEVLHRPTLLDERTAEESTSGTEAD
EDSGAVIANINDYTEIFRPSRALPRTPPPATSLSSEDFSLSGLTGEDNNLESGAALRDLS
LTRRDYGTENTVFSTVLKSNKEEKVFASAQTSLVKEFATSPLTTSSLNRHNSYKETKSST
DITSSNLRQSNSEVSLGPPSLAGARNSKCRPPSQIPRSRVEPPPPRSPEDRVPEPEFVPY
SIDRPVGLDLDEFLPRGACASGVGRGARGHAAEPSEQEVLGVMMRGHDSMMTVLAARQRA
LQIFHSVRINKSLKSALDSVIALEDASVILDILNVMAHKPSLWNLDICLLMLPKIYELLQ
SKYESYMQCGCNALRLIVRNFSSVVRANVSAPVRTLGVDIPREERYAKCAQIHRLLLDIR
AFLLKRQTLQGRLGAAFRDLHTLMQQGLD