| New model in OGS2.0 | DPOGS205765 |
|---|---|
| Genomic Position | scaffold3073:- 25971-28299 |
| See gene structure | |
| CDS Length | 777 |
| Paired RNAseq reads | 98 |
| Single RNAseq reads | 493 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009956 (2e-20) |
| Best Drosophila hit | U2A (1e-66) |
| Best Human hit | U2 small nuclear ribonucleoprotein A' (1e-68) |
| Best NR hit (blastp) | U2 small nuclear ribonucleoprotein A' [Bombyx mori] (2e-126) |
| Best NR hit (blastx) | U2 small nuclear ribonucleoprotein A' [Bombyx mori] (8e-113) |
| GeneOntology terms | GO:0005515 protein binding GO:0005681 spliceosomal complex |
| InterPro families | IPR001611 Leucine-rich repeat |
| Orthology group | MCL12078 |
Nucleotide sequence:
ATGGTCAAACTTACAACTGAACTCATCCAAAGCTCTATGCAGTATATAAATCCATGCAGG
GATCGTGAATTAGACCTGAGAGGATACAAAATACCACAAATAGAGAATTTGGGTGCTACT
TTAGATCAGTTTGACACAATTGATTTTTCTGACAATGATATAAGAAAGCTTGATGGGTTC
CCTCTTCTTAAACGACTAAAATGTTTATTCTTCAACAATAATAGGATTGTACGATTGACA
GAAAATTTGGAACAATACCTACCTAATTTGGAGACTCTTGTTTTAACTAATAACAATTTA
TCTGAGTTGGGTGACCTGGATCCTTTATCCACACTACCAAAATTAAGAACATTGTCACTT
ATGCACAACCCAGTCGCAAATAAACAACATTATAGGGCATATGTTGCTTACAAATTGCCT
GAACTAAGGTTGTTAGACTTCAGAAAGATAAAACAAAAAGAAAGAGATGAAGCAAATGCA
CTGTTTAAGAGCAAGAAAGGCAAGGAATTACAAAAGGAAATAACAAGAAAAGCAAAAACA
TTTGTTCCTGGTGGGAACTTGCCAGATCCTAAAGTTACAAACCTTGCACCTCAAGAAATA
CACAAAATTCGTGAAGCTATTAAAAATGCTTCATCATTGCAAGAAGTTGAACGTTTAACG
AGGATGTTACAATCGGGACAGATACCTGGCCAAAAACCTTTGCAACCACAGAGCCAATCA
AATGGACAACAAGACGAGGTTGAAGAGATGGAGACAGAACAATCTAATGGTCAGTAA
Protein sequence:
MVKLTTELIQSSMQYINPCRDRELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGF
PLLKRLKCLFFNNNRIVRLTENLEQYLPNLETLVLTNNNLSELGDLDPLSTLPKLRTLSL
MHNPVANKQHYRAYVAYKLPELRLLDFRKIKQKERDEANALFKSKKGKELQKEITRKAKT
FVPGGNLPDPKVTNLAPQEIHKIREAIKNASSLQEVERLTRMLQSGQIPGQKPLQPQSQS
NGQQDEVEEMETEQSNGQ