| New model in OGS2.0 | DPOGS206627 |
|---|---|
| Genomic Position | scaffold5867:- 920-7086 |
| See gene structure | |
| CDS Length | 1587 |
| Paired RNAseq reads | 533 |
| Single RNAseq reads | 1243 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG7146 (1e-91) |
| Best Human hit | vam6/Vps39-like protein (8e-89) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (2e-130) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (2e-128) |
| GeneOntology terms | GO:0005083 small GTPase regulator activity |
| InterPro families | IPR019452 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 |
| Orthology group | MCL13103 |
Nucleotide sequence:
ATGTTAAAACATAACATCACTATTTTCAATTCTAAATTTGAAAATGGAACAAATAAAATA
GATGATCAAGTTGTAATACAGACAGTGGAGCCGGCCTTGTTCATACAGACTTTGCCGGAT
TTAAACAAAGCAAGACTTATGTATAGATGTAAGCGTGGCCTTATATTCGTGTCGTCAGTG
GGTCAAGTGTGGTGTCTCAGCTCAGTGGACATCACCAAGCAGAGGCAGCAGCTGTTGAAG
GACAAACATTTCCAGATAGCCATAGATTTAACGAATCTGTCGGACTGCTCGCCTGACGAG
AAGCAGCAGTCAATACGCTCGATACAAAAGTTATACGCCATCGAGTTGTTCGAGAGCAAA
CTATACTCGCAGTCCATGAGGGAATTCATGAAACTTAACACAGATCTGGAGTTCGTTATA
AAGTTGTTCCCCGAAATAGACAACAAACCCGGTGCCGAGGTCAAGAAAGCGAAAGGGAAA
GATTCTGAGAACCCTCTTAACGCGTTGATAGAATATCTATTGGAGTATAGATCGAAGATC
GGGAAGAATGCTCAGGAATCGGCTGGCAAGGACGAGCCTAATCAGAAGACCATACAACAG
CAGTTAGAGCTGATCGATACTACGTTATTGAAGTGCTATTTACAGACAAACGACGCTCTA
GTGGCGTCGCTGCTGCGTCTCAATAACTGTCGTCTGGAGGAATCTGAGAGTACGCTTCAA
GCGCACGGCAAGCACAGCGAGCTGATCATCCTGTATCAGACGAAGGGCCAGCACACGCAA
GCGCTTCAGCTGCTGAGGGCGCAAGCCACCCAGCAGGACTCCAGCCTCAGAGGGTTCCAT
ATGACCAAGAATTACCTACAACACCTCGGCGCTGAACACTTGAATCTGATATTTAAATTC
TCCGATTGGATACTAGAGGAACATCCCGAAGAGGGTTTGAAGATCTTCACAGAGGATATA
GTCGAGGTGGAAAACCTGCCACGGCCCAAAGTATTGGACTTCCTGCTCAGAGAACACGAG
CCCCTGGTCATACCGTACCTGGAGCACGTGATCCACACGTGGAATGACACGCACTCGTTA
TTCCACGACGCCTTAATAAGAATGTATAGAGAGAGGATCACTGATAAGAAGTCCAACGCG
ACGGAGGAGGAACTGCAGCACATTAAGTCCAAACTGGTGTCGTTTTTAGAGAAATCCTCC
CACTACACTCCAGAGAGAGTCATATTGCACTTTCCGAACGACAGTTTGTTCGAAGAAAGA
GCCATTATTTTAGGAAAGCTTGGAAGACATGAGCAGGCTCTGTCGATATATGTACAGGTT
CTTGGTGACGTGGATAGAGCCATCAGGTACTGTGAGAACGTCGCTGATAAAAACGCAGAT
GTCTATGTGATATTGATAAGAATACTCATGAACCCGGAACAAAATACTTCATTGACTGGA
CCGCTGTCCAACGTACCGAGACACCCGAACGCCACTGTGCCCGACGTGGAGACGGCTCTA
AGCGTGCTGGAGAAACACGCGGACAAGATATCACCAATTAAGGTAATGCATGCCTATAAT
ACAAATAAATTCTCTCCAGATAAATGA
Protein sequence:
MLKHNITIFNSKFENGTNKIDDQVVIQTVEPALFIQTLPDLNKARLMYRCKRGLIFVSSV
GQVWCLSSVDITKQRQQLLKDKHFQIAIDLTNLSDCSPDEKQQSIRSIQKLYAIELFESK
LYSQSMREFMKLNTDLEFVIKLFPEIDNKPGAEVKKAKGKDSENPLNALIEYLLEYRSKI
GKNAQESAGKDEPNQKTIQQQLELIDTTLLKCYLQTNDALVASLLRLNNCRLEESESTLQ
AHGKHSELIILYQTKGQHTQALQLLRAQATQQDSSLRGFHMTKNYLQHLGAEHLNLIFKF
SDWILEEHPEEGLKIFTEDIVEVENLPRPKVLDFLLREHEPLVIPYLEHVIHTWNDTHSL
FHDALIRMYRERITDKKSNATEEELQHIKSKLVSFLEKSSHYTPERVILHFPNDSLFEER
AIILGKLGRHEQALSIYVQVLGDVDRAIRYCENVADKNADVYVILIRILMNPEQNTSLTG
PLSNVPRHPNATVPDVETALSVLEKHADKISPIKVMHAYNTNKFSPDK