| New model in OGS2.0 | DPOGS209012 |
|---|---|
| Genomic Position | scaffold9690:- 3221-4266 |
| See gene structure | |
| CDS Length | 537 |
| Paired RNAseq reads | 401 |
| Single RNAseq reads | 1794 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012550 (3e-88) |
| Best Drosophila hit | spase 18/21-subunit (1e-80) |
| Best Human hit | signal peptidase complex catalytic subunit SEC11C (2e-75) |
| Best NR hit (blastp) | signal peptidase 18 kDa subunit [Bombyx mori] (5e-97) |
| Best NR hit (blastx) | signal peptidase 18 kDa subunit [Bombyx mori] (9e-95) |
| GeneOntology terms | GO:0008233 peptidase activity GO:0006465 signal peptide processing GO:0005787 signal peptidase complex GO:0016021 integral to membrane GO:0008236 serine-type peptidase activity GO:0006508 proteolysis |
| InterPro families | IPR001733 Peptidase S26B, eukaryotic signal peptidase IPR019756 Peptidase S26A, signal peptidase I, serine active site IPR019758 Peptidase S26A, signal peptidase I, conserved site IPR015927 Peptidase S24/S26A/S26B/S26C IPR011056 Peptidase S24/S26A/S26B/S26C, beta-ribbon domain IPR019759 Peptidase S24/S26A/S26B |
| Orthology group | MCL16933 |
Nucleotide sequence:
ATGTTGGACAGTTTATTTGACGATGTGAAGCGCATGAATAAAAGACAGTTTATCTACCAA
GTTCTTAGCTTTGGTATGATAGTTTCTTCAGCTTTGATGATATGGAAGGGTTTAATGGTT
GTCACTGGTAGCGAGAGCCCTATTGTGGTTGTGTTATCCGGCAGTATGGAGCCAGCTTTT
CATAGGGGCGACCTTTTATTTTTGACTAACTACCCCGATGAACCCGTCCGTGTTGGAGAA
ATCGTCGTCTTCAAGGTCGAAGGCCGAGACATTCCTATTGTACACAGAGTGTTAAAGCTA
CATGAAAAGAATAATGGCACTGTTAAATTTTTAACTAAAGGTGATAACAATAGTGTTGAT
GATCGAGGCTTATACGCTCAAGGGCAGCTATGGCTGACAAAGAAGGATGTGGTAGGTCGT
ACTAGAGGGTTCTTACCATACGTTGGTATGGTTACAATATATATGAACGAATATCCTAAG
TTTAAGTTTGCTGTATTGGCGTGTTTGGCAATTTATGTCCTAGTACATAGAGAGTGA
Protein sequence:
MLDSLFDDVKRMNKRQFIYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAF
HRGDLLFLTNYPDEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVD
DRGLYAQGQLWLTKKDVVGRTRGFLPYVGMVTIYMNEYPKFKFAVLACLAIYVLVHRE