DPGLEAN04557 in OGS1.0

Genomic Positionscaffold4403:+ 489-1946
See gene structure
CDS Length1176
Paired RNAseq reads  0
Single RNAseq reads  2
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA011163 (1e-12)
Best Drosophila hit  ND
Best Human hitND
Best NR hit (blastp)  endonuclease-reverse transcriptase [Bombyx mori] (4e-138)
Best NR hit (blastx)  endonuclease-reverse transcriptase [Bombyx mori] (5e-143)
GeneOntology terms



  
GO:0003964 RNA-directed DNA polymerase activity
GO:0006278 RNA-dependent DNA replication
GO:0005622 intracellular
GO:0008270 zinc ion binding
GO:0003723 RNA binding
InterPro families  IPR000477 Reverse transcriptase
Orthology groupMCL10020

Nucleotide sequence:

ATGGCTAAAGACCCGAGAGCCAAACTGACCCGACACTTTACCGAGGATATCCCGGACATC
AGCCTGTTTGAGATTGAGATGGCCCTAAAACAGCTAAAGAACAACAAGGCACCGGGTGAG
GACGGAATTACTTCTGTACTTCTGAAAACAGGTTTGACGACTTTCAGCCTCCCGAATAAG
CTGGGTTCCGAAAAGGATATAGTACCGTATACGCTGCGCCAGGTTATACAGAAGACCGAG
GAGTATAACTTGCCACTCTGTCTAGCGTTTGTAGACTACGAAAAAGCCTTTGATTCGGTC
GAAACATGGGTGGTACTGGAGTCTCTACAGCGATGCCACATTGACTATCGGTATATCGAA
ATCCTGAAGTATTTGTATAGAAACGCCACTATGTCGGTCCGACTTCAGAAACAGAGTTCG
AGGGCGATTCCCTTAAAAAGAGGCGTAAGACAGGGAGACGTCATATCTCCGAGACTGTTC
ACGGCTGCTTTGGAAGACACCTTCAAGCTTCTGGAATGGGAAGGACTGGGCATCAACATT
AACAGCGAATACATTACTCACCTTCGGTTTGCCGACGATATCGTTGTCATGGCAAAGTCG
ATGGAGGAACTCAGTACGATACTCGAAGGCTTCAATCGAGTCTCCCAACGGGTAGGTCTT
AAAATGAACATGGACAAGACGAAACTCATGTCTAATCTCCATGTAGTACCTACCCCTGTT
ATGGTTGAGAACCCGGTACTTGAAGTTGTTGACGCGTATGAATACCTGGGACAGACAGTC
CAGTTAGGAAGGTCCACCTTCGATAAAGAAGTCCATCGTCGAATCCAGCTCGGATGGGCA
GCGTTCGAGAAGTTCCGTAACATCTTTTCGTCCAAAATGCCTCAGTGCCTTAAGACGAAG
ACTCAAAGAGCTATGGAGAGAGCTATGCTCGGAGTTTCTCTACGGGATCGAATCGGAAAT
AATGAGATACGTAGAAGAACGAGGGTCTCCGACATAGCTAAACAGATTAGCTATTGGAAG
TGGCAGTGGGCAGATCATATAGCCCGGAGAAAAGATGGCCGTTGGGGCCGAAAAGTGCTC
GAATCGAGACCACGGATCGGAAAGCGCAGCGACGGACGTCCACCAACGAGATGGACGGAT
GACTTAGTCAAGGCCGCCGGTTCACGGTGGATGTAG

Protein sequence:

MAKDPRAKLTRHFTEDIPDISLFEIEMALKQLKNNKAPGEDGITSVLLKTGLTTFSLPNK
LGSEKDIVPYTLRQVIQKTEEYNLPLCLAFVDYEKAFDSVETWVVLESLQRCHIDYRYIE
ILKYLYRNATMSVRLQKQSSRAIPLKRGVRQGDVISPRLFTAALEDTFKLLEWEGLGINI
NSEYITHLRFADDIVVMAKSMEELSTILEGFNRVSQRVGLKMNMDKTKLMSNLHVVPTPV
MVENPVLEVVDAYEYLGQTVQLGRSTFDKEVHRRIQLGWAAFEKFRNIFSSKMPQCLKTK
TQRAMERAMLGVSLRDRIGNNEIRRRTRVSDIAKQISYWKWQWADHIARRKDGRWGRKVL
ESRPRIGKRSDGRPPTRWTDDLVKAAGSRWM