DPGLEAN04564 in OGS1.0

New model in OGS2.0DPOGS200344 
Genomic Positionscaffold640:- 70719-72239
See gene structure
CDS Length1065
Paired RNAseq reads  206
Single RNAseq reads  608
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA005639 (4e-56)
Best Drosophila hit  DNA fragmentation factor-related protein 4 (4e-45)
Best Human hitDNA fragmentation factor subunit beta (1e-39)
Best NR hit (blastp)  putative caspase-activated DNase [Heliconius melpomene] (1e-153)
Best NR hit (blastx)  putative caspase-activated DNase [Heliconius melpomene] (2e-147)
GeneOntology terms



  
GO:0004537 caspase-activated deoxyribonuclease activity
GO:0006309 DNA fragmentation involved in apoptotic nuclear change
GO:0005737 cytoplasm
GO:0005634 nucleus
GO:0005515 protein binding
InterPro families
  
IPR003508 Caspase-activated nuclease CIDE-N
IPR015311 Apoptosis, DNA fragmentation factor 40kDa
Orthology groupMCL12918

Nucleotide sequence:

ATGAAAAAAGGATATAAGGTGACCGATGTTAAAAGGGAGAAAAAAATTGGTGTCGCTGCT
GAGAACCTAGAGGAACTTATTGAGAAGTCCTGTAAAAAGTTAGGGTTCAATGTCAGCTGC
GCAGAGTGCCGTCTGTATGTGGCTGAGGACGGGACTCAGGTAGACGACGAGGACTATCTC
AGAACCTTAGCACCACAAACATTATTTATTCTGTTACAGGAAAATGAAACAATGGTTACT
GACTTTGACTACTTCTACAATATGATTTCTTCTGTCAAAAAGGATTACCTTAACACAGGG
AAGGCTGCTAAGGAATTTCTAAATGTCAATCTTAAAGAAAAATTTAAAGTACTTGAAAGA
TACATTTCAGCAGCTAACGATTCTAGGGCTATGATAAGTGAGAGGACTCAGGATCCAGAC
TGGTTTGAAGGTCTTGATTCAAGTGAGAAAACAAAAGAACAGTCAATGTCAAAAAGAGCC
AAGGAACGCATGAGGGGTTATTATTACAAAACTAAAACAGCATTACAGTCTTCGCAACTG
TATATACACACGAAAAACGGACAAAGCAAGAAACTCATAGACCTGTTCCTATTGGAATTA
CGTAGAAGACTTGAAAATAGTAAGTATAATGGGGATTACTTTAATAGGAAAGGTAGTGAA
GGTGTACGATTGTGCAACGAAAATGGTCTCTTTGAATGTGGAGGGCTATGGAATAATAAG
AAATGTATTTACGAAGGTGAACATGTGATCAATCCTTATAGAAGCCGCGAAGAAAGGATT
ATATTCCAAACTTGGAATTTAGATCACAAGATTGAGTTGTCTCGGTCCATCATACCGAAT
ATACAAGAGGCGATCAGGAATATTATTCATGCAAATGTAAAATGCGTGATGTGCAACGTA
AGTTCGGGTAAAGGTCACATAGAAATTGACCGATACTATTTACAAATATTCACTAGCGAT
AATCTAAAATTAGTTCATATAGTTTGTCATGATAAAGGCAAACACAGTGCTGAATCGAGT
GCTTACATTTTATGCCAAAAATGTTTTGGTAATTATAGAGTTTAA

Protein sequence:

MKKGYKVTDVKREKKIGVAAENLEELIEKSCKKLGFNVSCAECRLYVAEDGTQVDDEDYL
RTLAPQTLFILLQENETMVTDFDYFYNMISSVKKDYLNTGKAAKEFLNVNLKEKFKVLER
YISAANDSRAMISERTQDPDWFEGLDSSEKTKEQSMSKRAKERMRGYYYKTKTALQSSQL
YIHTKNGQSKKLIDLFLLELRRRLENSKYNGDYFNRKGSEGVRLCNENGLFECGGLWNNK
KCIYEGEHVINPYRSREERIIFQTWNLDHKIELSRSIIPNIQEAIRNIIHANVKCVMCNV
SSGKGHIEIDRYYLQIFTSDNLKLVHIVCHDKGKHSAESSAYILCQKCFGNYRV