| New model in OGS2.0 | DPOGS200350 |
|---|---|
| Genomic Position | scaffold640:- 24680-36088 |
| See gene structure | |
| CDS Length | 1197 |
| Paired RNAseq reads | 1653 |
| Single RNAseq reads | 3831 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005643 (4e-91) |
| Best Drosophila hit | washout (9e-16) |
| Best Human hit | WAS protein family homolog 1 (2e-29) |
| Best NR hit (blastp) | putative WAS protein family homologue 1 [Heliconius melpomene] (1e-111) |
| Best NR hit (blastx) | putative WAS protein family homologue 1 [Heliconius melpomene] (3e-108) |
| GeneOntology terms | GO:0005769 early endosome GO:0016197 endosome transport GO:0034314 Arp2/3 complex-mediated actin nucleation GO:0042147 retrograde transport, endosome to Golgi GO:0043014 alpha-tubulin binding GO:0055037 recycling endosome GO:0071203 WASH complex |
| InterPro families | IPR003124 Actin-binding WH2 IPR021854 WASH complex, subunit WASH |
| Orthology group | MCL10857 |
Nucleotide sequence:
ATGGAGGGTCTTTATAAAATTAATTTGATACCCAACGACCTTAGCGTCGAAGAAACCGTG
TTACAAATAGCCGATACATTAGACAATCTGAATGGGATAGTTGACGATGTTTTTAAACGT
ATATCAAATAAAATTAAAATCAACGTTGAAAAGACGTCGAAACTTCAGGAGAGAATCAAT
GTATCCAGGACAAAAGTTGAAAAACTTGCCGGGACACAGAAGGCGATCAAAGTATTTTCA
AGCGCTAAATACCCGTCGTCTATAACACACGAACATTACAAATCCATTTTCGAATCAAAC
GATTATAATTATGAACCCAAAAACGTTATACCAACCGGAAAATCCAACAGACAGACAAAC
GAAAAAGCCATCCAGGAGAAACTTCATTTCTTCCACGTGAAAGTCGCTGAACCTAAAAAT
AATAAAACCAGGAACGATTTCGATCTGAATACGGTTTTGAATTCAATAACATCAATCGGA
GATCTCCTTATATACAAGAGCGACGAGAGCCCGTACTTTGGTAGTAAAACCAAAGGGCAG
ACTTACGTGCCCAAAGTAAACACGACCGTAGATAAGGGCTCGTTGGACGAAGCACCACCC
TCTATTGTGAAAAAGAATCTGTTGAAGCGAGAAATCGACGAGTACATGTACGCTCCAGGA
ATGGGCTTGGTGCCAGAATTGGACATGCCCCTGGATCTTCCACATCTTCCCGGTATAGCC
GGGGACGTTCAGTATTCGGTTACTGGGGATGGGTCTATAGCGCCATCAGCTGTAACATCA
CCCGTCGCCATCACAAACCCCATCCCCCGCCCCCGCCGCCACCACCCCCGCCGCCGATGG
AGATCACACAAACGCCAAATAGCTAATTTTGGGTTCCTTGTCCACAGACGAGAGCAGCGT
GAAGCTAGTGCTGCTGCCCCGCCTCCGCCCGTGGATGCCCACGCGAACCTGATGGCGGCC
ATCCGGCAGGCGGGCGGCGTCGGACGGGCGAAGCTGCGGCACGCTGACGACGTAACAACA
GAAAAGGCGAGCAAACCTGTCGGTGGCGATCTGATGGCTGATCTTCACGCCAAGCTGTCG
ATGCGTCGTCGTGGCATATCGGGTGCTGAGGGTACCGTGCTTCATACGCTGGCGAGGGTT
ATACCGGAACCGGGGGAAACTACCGAGAGGTCCTCCAGCGACGACGAATGGGATTAA
Protein sequence:
MEGLYKINLIPNDLSVEETVLQIADTLDNLNGIVDDVFKRISNKIKINVEKTSKLQERIN
VSRTKVEKLAGTQKAIKVFSSAKYPSSITHEHYKSIFESNDYNYEPKNVIPTGKSNRQTN
EKAIQEKLHFFHVKVAEPKNNKTRNDFDLNTVLNSITSIGDLLIYKSDESPYFGSKTKGQ
TYVPKVNTTVDKGSLDEAPPSIVKKNLLKREIDEYMYAPGMGLVPELDMPLDLPHLPGIA
GDVQYSVTGDGSIAPSAVTSPVAITNPIPRPRRHHPRRRWRSHKRQIANFGFLVHRREQR
EASAAAPPPPVDAHANLMAAIRQAGGVGRAKLRHADDVTTEKASKPVGGDLMADLHAKLS
MRRRGISGAEGTVLHTLARVIPEPGETTERSSSDDEWD