| New model in OGS2.0 | DPOGS203686 |
|---|---|
| Genomic Position | scaffold120:- 146204-153351 |
| See gene structure | |
| CDS Length | 2604 |
| Paired RNAseq reads | 2242 |
| Single RNAseq reads | 5509 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003480 (0.0) |
| Best Drosophila hit | CG7843, isoform C (3e-111) |
| Best Human hit | serrate RNA effector molecule homolog isoform e (1e-93) |
| Best NR hit (blastp) | arsenite-resistance protein, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | arsenite-resistance protein [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0005654 nucleoplasm GO:0031053 primary microRNA processing |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait IPR007042 Arsenite-resistance protein 2 IPR021933 Protein of unknown function DUF3546 |
| Orthology group | MCL14206 |
Nucleotide sequence:
ATGGCTGATAGCGACGACGAGTATGACCGCAAGAGACGCGATAAATTCCGTGGTGAAAGA
GGAGCAGCAGAAGGCAGCAGTTATCGAAACAGCGATAGACGAGAGGAACGAGGACGCGGT
AGAGAGGAATGGTCAGAAAGGTCTCGTGGAGGTAGATCAGGACCCGACTACAGAGATTAT
AGAGGTGGAGCAAGTGCAAGTCGTGGGTATTCTCCAGTTAGAGGTGAAGGGCCTCCTAGC
AAACGAATCAGACCAGACTGGCCAGTTGATGATAGAAGATATGGCGGTATGCCTCATGAC
TCATATGGCTCATATGGTTGGGCCCACGACCACTTTGGACCGCATCCTGCTCATCAAGGA
TATGGTCAACCAATGCCTCCTGTACCAGCCAGAGATGCTGTTCTGCCGATGGGACCAACT
GATGGGCCACCTTCAATGATGTCATTCAAGGCTTTCCTGGCTGCTCAAGACGATGCTATC
ACCGTTGATGACGCTATACAGAAGTATAATGAATACAAACTTGAATTTAGGAGGCAGCAA
TTAAATGAATTTTTTGTAGCACACAAAGATGAGGAGTGGTTCAAGATAAAATACCATCCA
GAGGAATCGGTGAAACGTAAAGAGGAGCAACTAGCTGCGCTTAAGAACCGACTTAACGTA
TTTCTTGAGCTCCTGGAACAACGCGAATTGGACAAAGTATCAGTGGATGTTGACAAGTCG
GACAAGTTGATACGTTTACTTGACACTGTTGTTATTAAATTAGAAGGCGGAACAGAGGAA
GATCTTAAAGCTCTCGACGAACCCAACCCAGCGGAAAATGCAAATGACAAACAAGATAAG
AATGACACGAATAAGGCAATTGTAATTGAAGACGATGCGGTCAAAGAAATTAAGGATGAG
AAAGACACCGAACAGAACAAGGATAAGATTAATTCAACTGAGGAAAAAAAGGAAGATTCT
CCAAAAAAAACCGCACCGCTTACGATGGAGATCGACCCTCACCTCCGTCAGCTACAAGAA
CAGGCCAAACTTTTTTCTCGTTACAACAGTGTGCCTGGAACGGAATCGGAACAAGTTGTA
CCCGAGAAAGAACCTCCTCCGCCAGGTTCTTCATCGAGCTCATCATCATCGAGTTCATCG
TCATCAAGTTCGGAAGACGAAGGGGAAACCGGAACGCGCAGGAAATCAAAATCCAAGTCT
AAATCCAAAACTCCCGACAAGTCGCCGAAACAAAAGGAACGGACCGCGTCACCGAGCGCA
GAGAAAGTCGTCGAAATAAAAGACAAGGAGGCGAGCAATGATAATAATGAAACTTCCATT
GATGTGACGGAGAAGAAAGAATCCAGGGCTCTCCATAAAACAACTTCCATTTTCTTAAGA
AATCTAGCTCCAACGATCACGAAGGCTGAAGTAGAAGCTATGTGTAAACGTTACGGTGGG
TTCCTGCGCGTGGCGCTCGCAGACCCACTGCCCGAAAGACGATGGTTCCGCAGAGGTTGG
GTCACGTTCCGACGAGAGGTCAACATCAAGGACATCTGCTGGAATCTTAATAATATAAGG
CTTCGCGAGTGTGAGTTGGGTGCGATAGTAAACCGCGATCTTCAGCGTCGTATCCGAGCT
GTCTCCGGCGTCACTTTGGAGCGAGCGGTGTTGCGGGCTGACGCTAGACTCGCGGCTAGA
CTCGCACACCATCTAGACACTAGGTCTAGACTGTGGGACGGACCTGGTGAAGATGGACCG
CAGACTGAGAACTTCAGTTTGAGCTCCAAAAACCCGGTGCTACATAAGATAACGGAACAT
CTCATAGAAGAGGCTTCAACGGAGGAAGAAGAGTTGCTCGGTCTGGAGGCGTCGTCGGAG
GCCGCGGCGCATGAACAACCGGATCCGGAACTCATCAAAGTGTTGGACCGCCTAGTGTTG
TACCTTCGTATTGTACACTCTGTGGACTATTACAATCATTGTGAATATCCATACGAGGAC
GAGATGCCAAACCGTTGTGGTATTATGCATGCGCGCTCCGGACCTCCTCCTAACAAGCCC
ACTCAGCAGGAGATCCAAGATTATATTAAAACTTTCGAAGGTAAAATGTCAGCTTTTCTG
CAAGATGTCAAACCGCTGACAGACGAAGAGCTGCAGAAACTAGGAATTAAGGACTCCGAG
GCAGAAGTAGAAAAGTTCATTCAAGCTAACACTCAAGAGCTGTCTCAAGACAAATGGTTG
TGCCCACTCAGCGGTAAAAAGTTCAAGGGACCAGATTTCATAAGAAAGCACATCTTCAAT
AAACACGCTGAAAAGGTGGATGAGGTCCGCCGCGAGGTGTCGTACTTCAACGCGTACGTT
AAAGACGTGCGACGTCCCCAACAACCCGAGCAACCGGCTCGCGCCGCGCCACAACCCGTG
CACGCGCCGCCGGCACATCCATATAGTGGAGCTGGTGGAGCAGGCGGTGGTCGCGGCTGG
GGATGGGGCGGCTGGGCACCACCCGCGCCTTACATGCCCAGACACCCGCGGTTCTCGAGA
CCCAGGGCCGGTGCCGCGGAGTTCCGTCCGGTGATACACTATCGCGACTTGGACGCGCCG
CGGGAACCCGACGAGTTCATTTAA
Protein sequence:
MADSDDEYDRKRRDKFRGERGAAEGSSYRNSDRREERGRGREEWSERSRGGRSGPDYRDY
RGGASASRGYSPVRGEGPPSKRIRPDWPVDDRRYGGMPHDSYGSYGWAHDHFGPHPAHQG
YGQPMPPVPARDAVLPMGPTDGPPSMMSFKAFLAAQDDAITVDDAIQKYNEYKLEFRRQQ
LNEFFVAHKDEEWFKIKYHPEESVKRKEEQLAALKNRLNVFLELLEQRELDKVSVDVDKS
DKLIRLLDTVVIKLEGGTEEDLKALDEPNPAENANDKQDKNDTNKAIVIEDDAVKEIKDE
KDTEQNKDKINSTEEKKEDSPKKTAPLTMEIDPHLRQLQEQAKLFSRYNSVPGTESEQVV
PEKEPPPPGSSSSSSSSSSSSSSSEDEGETGTRRKSKSKSKSKTPDKSPKQKERTASPSA
EKVVEIKDKEASNDNNETSIDVTEKKESRALHKTTSIFLRNLAPTITKAEVEAMCKRYGG
FLRVALADPLPERRWFRRGWVTFRREVNIKDICWNLNNIRLRECELGAIVNRDLQRRIRA
VSGVTLERAVLRADARLAARLAHHLDTRSRLWDGPGEDGPQTENFSLSSKNPVLHKITEH
LIEEASTEEEELLGLEASSEAAAHEQPDPELIKVLDRLVLYLRIVHSVDYYNHCEYPYED
EMPNRCGIMHARSGPPPNKPTQQEIQDYIKTFEGKMSAFLQDVKPLTDEELQKLGIKDSE
AEVEKFIQANTQELSQDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVDEVRREVSYFNAYV
KDVRRPQQPEQPARAAPQPVHAPPAHPYSGAGGAGGGRGWGWGGWAPPAPYMPRHPRFSR
PRAGAAEFRPVIHYRDLDAPREPDEFI