| New model in OGS2.0 | DPOGS203808 |
|---|---|
| Genomic Position | scaffold120:+ 38683-40808 |
| See gene structure | |
| CDS Length | 1254 |
| Paired RNAseq reads | 232 |
| Single RNAseq reads | 960 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003714 (2e-121) |
| Best Drosophila hit | arc, isoform B (5e-24) |
| Best Human hit | PDZ domain-containing protein 2 (4e-20) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (4e-35) |
| Best NR hit (blastx) | pdz domain protein arc, putative [Pediculus humanus corporis] (2e-24) |
| GeneOntology terms | GO:0005912 adherens junction GO:0048749 compound eye development GO:0016324 apical plasma membrane GO:0005515 protein binding |
| InterPro families | IPR001478 PDZ/DHR/GLGF |
| Orthology group | MCL30961 |
Nucleotide sequence:
ATGGGTGCCCCAGCATGGGGGTCGCGTGGTGGCGATCGTCCCCGCCTGCTTCGGATGACG
CCACTGCGACATAGCTTTGCCGCGCCAGCCACGCCGCCGGCGCAGCAACAACGGACACAT
GACTACGCATCTGATGCTGATAGTAACAAAAAAGAAGAAAGCTGGAATGCCAACTTGTCG
CAGAGATGGAGAAAGTTACGACGTAGGTGTTCCCGACTACGGCCTGGATCTGGCAATCGT
GAAGCAAGTCCCGTACGATGTTCTCCATCACCACCGCGACCTCAACCACAATGTTCACCT
CCACCCCCATCAAAACTCTCATTTAGACATCGTGGTAAAGTTTACACAACCGCTTCTTTA
CGTGTCACCAGCGGAGCACCGGACTTGCTCAGAGCGCTGGGGAAATTAGGAGGAGGATTA
AGAAGACGTGCTCTTTCCGCCCATGACGTGCTTACACCACCTCAACCGCAACAACCAGCA
ACTTTTTATGTTCCTAGTCCAAGTACAACTCGGTCTCCCTCGTCACCAATGTCACACAGA
GAGGCTACAGTTCGCAGACGATGTAGCTCCCCTAATGTGTATAGACCTAAAGATGTACCT
AGAGATCGAGCACCACTTATATCTCAAGAAGATGAAAGTCGAGACGTTGTTGATTACAAC
TACACGCCTGAAAGAAGGAAACCGCACAAAGAGATAAGAAGTCGACCATATAGCGAAAAC
GTAGAAATAGATCCTAAATTCAAAAATGGCTATAATCGTCTCACCCCAGAACCTACTGAG
AGACTATGGGAAGAGCCTTATCGACTACCCCGTGTACAGGTTCGTCAAGAACCTATTCAA
CAATTAAGAAATTGTGTAGCTGAGTTAAGAGTTAGCACTACTCCACGGGCTCCACGCCCT
CCTCCGGCTCCTACATCCCCGCAGAAAATAATTAAACGACCGCCAGCTCCTGAACCCCGA
GATTCAAATACCTTTGAGGTGCGTTTCACCAAATCAGCTGGAGGTAAAGGACTCGGGTTT
AGCATCGTAGGCGGACGTGATTCACCTCGTGGGGACATGGGCATATTTGTAAAAACTATA
TTTAATAACGGCCAAGCCGCTGAGTCTGGACTACTTCGAGAAGGGGACGAGGTTCTTTCA
GTTAACGGTCGTGGTACGGCTGGTTTAACTCACAGCGAAGCTATAAGGCTGTTTAAGGAC
GTGCGTGCGGGACCGGTGTTGCTAAAAGTAACAAGACGTGCTCCAACTCGCTGA
Protein sequence:
MGAPAWGSRGGDRPRLLRMTPLRHSFAAPATPPAQQQRTHDYASDADSNKKEESWNANLS
QRWRKLRRRCSRLRPGSGNREASPVRCSPSPPRPQPQCSPPPPSKLSFRHRGKVYTTASL
RVTSGAPDLLRALGKLGGGLRRRALSAHDVLTPPQPQQPATFYVPSPSTTRSPSSPMSHR
EATVRRRCSSPNVYRPKDVPRDRAPLISQEDESRDVVDYNYTPERRKPHKEIRSRPYSEN
VEIDPKFKNGYNRLTPEPTERLWEEPYRLPRVQVRQEPIQQLRNCVAELRVSTTPRAPRP
PPAPTSPQKIIKRPPAPEPRDSNTFEVRFTKSAGGKGLGFSIVGGRDSPRGDMGIFVKTI
FNNGQAAESGLLREGDEVLSVNGRGTAGLTHSEAIRLFKDVRAGPVLLKVTRRAPTR