| New model in OGS2.0 | DPOGS203809 |
|---|---|
| Genomic Position | scaffold120:+ 80707-82721 |
| See gene structure | |
| CDS Length | 1248 |
| Paired RNAseq reads | 102 |
| Single RNAseq reads | 298 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003715 (0.0) |
| Best Drosophila hit | nicotinic acetylcholine receptor alpha 34E, isoform D (1e-162) |
| Best Human hit | neuronal acetylcholine receptor subunit alpha-7 isoform 1 precursor (2e-92) |
| Best NR hit (blastp) | nicotinic acetylcholine receptor subunit alpha 7 isoform 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | nicotinic acetylcholine receptor subunit alpha 7 isoform 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0045211 postsynaptic membrane GO:0006811 ion transport GO:0042166 acetylcholine binding GO:0016021 integral to membrane |
| InterPro families | IPR006201 Neurotransmitter-gated ion-channel IPR018000 Neurotransmitter-gated ion-channel, conserved site IPR002394 Nicotinic acetylcholine receptor IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006202 Neurotransmitter-gated ion-channel ligand-binding |
| Orthology group | MCL10265 |
Nucleotide sequence:
ATGAATTTGAGATGGAACACTTCGGACTTTGGCGGAGTCAAAGATTTACGCGTTCCACCA
CATAGATTATGGAAACCAGACGTGCTTATGTACAACAGTGCAGACGAAGGTTTTGATAGC
ACCTACCCTACAAATGTAGTAGTGCGAAACAACGGCTCCTGTCTCTACGTACCGCCTGGA
ATCTTTAAAAGCACTTGCAAAATAGACATAACCTGGTTTCCTTTTGACGACCAAAGATGC
GAAATGAAGTTTGGGAGTTGGACATACGATGGTTATCAACTGGATCTTCAATTGCAAGAT
GAAGCCGGCGGAGATATAAGTAGTTTTGTTACAAACGGAGAATGGGAACTTATAGGAGTA
CCAGGAAAACGTAATGAGATCTACTACAACTGTTGCCCCGAGCCATATATTGACATAACC
TTCGCAGTAGTTATTCGGCGGAAGACTTTATACTATTTTTTCAATCTTATCGTGCCGTGT
GTTCTTATTGCTTCCATGGCATTGTTAGGGTTCACGTTGCCACCGGATTCTGGTGAAAAA
CTCTCGTTAGGTGTTACAATATTGCTGTCTCTGACAGTATTTTTGAACATGGTAGCAGAG
ACGATGCCAGCAACGTCAGATGCAGTACCTCTACTAGGCACATATTTTAACTGCATTATG
TTTATGGTGGCATCTTCTGTCGTATCAACAATACTTATCCTTAATTACCATCATAGACAT
GCGAATACACACGAAATGAGTGATTGGATTCGGTGCGTGTTTTTGTATTGGCTACCTTGG
ATTCTTCGAATGTCGCGACCGGGTTCAGCGACTACTCCACCGCCAGCTCGCGCGCCTCCT
CCCCCAGACTTGGAATTGCGCGAGCGATCTTCAAAGTCGCTATTAGCCAATGTGCTCGAC
ATCGATGATGACTTCCGGCATACCCACGCGCAACAACCACCCTGCTGCCGATACTACAGG
TCCCTCGACGATCTACACGAACACTACTCTCCAAGTGGTGAAGAAAATGGCGCGGGTTTA
GCAGCGCATAGCTGTTTTGGTGTCGACTACGAACTCTCTTTGATACTAAAAGAGCTTCGA
GTCATCACAGATAAGATGCGCACAGACGACGAAGAGGCGGACATTTCGCGCGACTGGAAA
TTCGCTGCCATGGTCGTGGACAGACTGTGCCTTATTATCTTTACCCTGTTCACAATCATT
GCCACGCTAGCCGTGCTACTGTCCGCACCACACATCATGGTGTCGTAG
Protein sequence:
MNLRWNTSDFGGVKDLRVPPHRLWKPDVLMYNSADEGFDSTYPTNVVVRNNGSCLYVPPG
IFKSTCKIDITWFPFDDQRCEMKFGSWTYDGYQLDLQLQDEAGGDISSFVTNGEWELIGV
PGKRNEIYYNCCPEPYIDITFAVVIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDSGEK
LSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRH
ANTHEMSDWIRCVFLYWLPWILRMSRPGSATTPPPARAPPPPDLELRERSSKSLLANVLD
IDDDFRHTHAQQPPCCRYYRSLDDLHEHYSPSGEENGAGLAAHSCFGVDYELSLILKELR
VITDKMRTDDEEADISRDWKFAAMVVDRLCLIIFTLFTIIATLAVLLSAPHIMVS