| New model in OGS2.0 | DPOGS203826 |
|---|---|
| Genomic Position | scaffold120:+ 437861-439077 |
| See gene structure | |
| CDS Length | 723 |
| Paired RNAseq reads | 1011 |
| Single RNAseq reads | 2591 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003730 (7e-85) |
| Best Drosophila hit | CG17454 (3e-35) |
| Best Human hit | survival of motor neuron-related-splicing factor 30 (1e-22) |
| Best NR hit (blastp) | GK12901 [Drosophila willistoni] (1e-54) |
| Best NR hit (blastx) | survival motor neuron protein [Culex quinquefasciatus] (6e-43) |
| GeneOntology terms | GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005681 spliceosomal complex GO:0005737 cytoplasm GO:0003723 RNA binding GO:0005634 nucleus GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR018351 Tudor subgroup IPR010304 Survival motor neuron IPR002999 Tudor domain |
| Orthology group | MCL14449 |
Nucleotide sequence:
ATGGCTGACGATTTGAGAAATTATAATTTACAATTGCAGCAGGTTGAGGCGGCATTATTG
ACAGACCCTGAAAACGAAGAGTTGCTGAAACTGAAATCGGATTTGGAAGAAGTAATTGAG
TTGACACGCGATCTTATAAAAACTCAAGAGGGTGAATCCAAAGTGCATAATATTCATAGT
TCTAGTAATAATGATGATGTTGCAGCTTCCCTGCTGGCTGAGGACGACAACGAATATGTA
GAGAAGCCCAACTCAAAGTGGCACCCTGGCGAGAAATGCTTGGCAAAGTGGAAAACGGAT
GGCGTGTATTATGAGGCAACTATAGAAGAGGTCTATGAGAATAATCTGAAAGTTAGGTTT
GATGGCTATTTAAAATCAGAGATCATATCAATTCTAGATATTAAAGCAATGGCATCTGGA
TCTAAGCGTCCATTAAGTGGCGATGAAAGCAAATCTGGCAAAGGTTACAACAGAGAGTAT
TTAAAAAAGAAAAAACAAAAGAAACAACAGAGATTTAAACAAATTGAGGAAGAGAGGGAA
AGTGAAAAGAATAAGTGGCTATCCTTTCACACAAAGGCATCTAGAAAGCCTGGTGTCAGA
ACAAAAAGTATATTTGCATCCCCAGACAATTTAACTGGCCGTGTTGGTATTGGAACTTGT
GGAATTTCAGGAAAACCAATGACAGAGTATACTCCGGGTGAAAAGTGGAAGAAGGGTGGA
TAA
Protein sequence:
MADDLRNYNLQLQQVEAALLTDPENEELLKLKSDLEEVIELTRDLIKTQEGESKVHNIHS
SSNNDDVAASLLAEDDNEYVEKPNSKWHPGEKCLAKWKTDGVYYEATIEEVYENNLKVRF
DGYLKSEIISILDIKAMASGSKRPLSGDESKSGKGYNREYLKKKKQKKQQRFKQIEEERE
SEKNKWLSFHTKASRKPGVRTKSIFASPDNLTGRVGIGTCGISGKPMTEYTPGEKWKKGG