| New model in OGS2.0 | DPOGS200332 |
|---|---|
| Genomic Position | scaffold875:+ 7963-44605 |
| See gene structure | |
| CDS Length | 942 |
| Paired RNAseq reads | 850 |
| Single RNAseq reads | 2342 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005582 (2e-100) |
| Best Drosophila hit | suppressor of cytokine signaling at 16D (3e-07) |
| Best Human hit | suppressor of cytokine signaling 2 (2e-19) |
| Best NR hit (blastp) | PREDICTED: similar to suppressor of cytokine signaling 2 [Tribolium castaneum] (7e-35) |
| Best NR hit (blastx) | PREDICTED: similar to suppressor of cytokine signaling 2 [Tribolium castaneum] (1e-33) |
| GeneOntology terms | GO:0005515 protein binding GO:0023034 intracellular signaling pathway |
| InterPro families | IPR000980 SH2 motif IPR001496 SOCS protein, C-terminal |
| Orthology group | MCL18036 |
Nucleotide sequence:
ATGGAGGGTTTGTCGGAGGCCCGCAAGGAGGTGGCTACTGTCTCTATTCATCACACTGCC
ATCCTTCCATCGGCGGCTGTGGACCCTGTGGGCCTTTACCAGGCCCTTCTGCGTATGAAA
TGGGTGCAACTGCGCGCGCGGCAGATGGCTCATCGCTGTGAAAGCTGCGCAGATGCATGT
GTGGAGGTGGGAGGGGTGCTCAATAATTGGTCAACAGGCATTGCTTGTCCCAACTGCCGG
CATCAATTACGTGTGTCACTGGCACATACCAAGACCACACAGAACCCAATCAGCCCTCTG
ACACCACCATTCACAATTCAGCCCTCATTCTTGCCACATTCACCACTGTATGCAGCACCA
TCACCTCCAGTTATATCCTCACCATATAATGATGAGCTCCGACGGTTAGCTGACACTCTC
AGAGCTTTGAGGCTTTCTGGATGGTATTATGGAAATCTAGATTGGCAGGGGGCTCGAAGT
TTATTGAAAGATGCCAGTATAGGTGCCTTTGTAATACGGGATTCTGGAGATAGAAATTTT
ATATTCTCGCTTTCTGTTCAGACTGAAAGAGGGCCAACTTCTGTAAGATTACATTATGAA
CAAGGTTCCTTTAGGTTAGATTGTGATAGACCTCTTGCCAGGTATATGCCTAGATTCAGA
TGTGTTGTGGAATTGGTGCAGCATTACACCCAAGTAGGAGAAAGAGGACCAGCTGGTACT
GTGTGGGTGGATCGAGAAGGATGTCCACACTCACCTGTACTTCTGAAAACACCATTAAGG
AAATCACCGCCTTCTCTCCTCCACTGTGCACGGTTAGCAGTTCACAAGGCACTGGACTCC
AATCCTCTAACACCCAAATTGTGGTGTGCCCCTAAACATAGGTTGTTACCTCTTCCCTCA
ACACTCATAGACTACCTTGGGGAGTATCCATACTCAATCTAA
Protein sequence:
MEGLSEARKEVATVSIHHTAILPSAAVDPVGLYQALLRMKWVQLRARQMAHRCESCADAC
VEVGGVLNNWSTGIACPNCRHQLRVSLAHTKTTQNPISPLTPPFTIQPSFLPHSPLYAAP
SPPVISSPYNDELRRLADTLRALRLSGWYYGNLDWQGARSLLKDASIGAFVIRDSGDRNF
IFSLSVQTERGPTSVRLHYEQGSFRLDCDRPLARYMPRFRCVVELVQHYTQVGERGPAGT
VWVDREGCPHSPVLLKTPLRKSPPSLLHCARLAVHKALDSNPLTPKLWCAPKHRLLPLPS
TLIDYLGEYPYSI