| New model in OGS2.0 | DPOGS201669 |
|---|---|
| Genomic Position | scaffold2520:+ 10894-15397 |
| See gene structure | |
| CDS Length | 1170 |
| Paired RNAseq reads | 795 |
| Single RNAseq reads | 1753 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005458 (3e-101) |
| Best Drosophila hit | serine pyruvate aminotransferase (2e-76) |
| Best Human hit | serine--pyruvate aminotransferase (2e-78) |
| Best NR hit (blastp) | PREDICTED: similar to serine-pyruvate aminotransferase, mitochondrial [Tribolium castaneum] (1e-92) |
| Best NR hit (blastx) | PREDICTED: similar to serine-pyruvate aminotransferase, mitochondrial [Tribolium castaneum] (7e-90) |
| GeneOntology terms | GO:0005515 protein binding GO:0006625 protein targeting to peroxisome GO:0030170 pyridoxal phosphate binding GO:0042803 protein homodimerization activity GO:0046487 glyoxylate metabolic process GO:0046724 oxalic acid secretion |
| InterPro families | IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site IPR000192 Aminotransferase, class V/Cysteine desulfurase IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 |
| Orthology group | MCL11445 |
Nucleotide sequence:
ATGCTATCCAAAAAAGTTACTGTACCAGTGCCAAGGATAACTGATCGTAAAGTCAGAAAA
CTTCTTCTGTGTGGTCCGGGCCCGTGTAACCTGTGGCCATCAGTTACTGAAGCCCTCACT
CAACCTATTCTATCACCGTTGTGCGATGAATATTTCAGAATTATGGAAGATATTCGTAAC
GGCCTAAAATATTTATTCCAAACACAAACCGATTTGGTATTAGCAATCAGTGGTTCTGGC
CACGCTGGGATGGAAACCGTCATATCTAATCTTATTGGACCGAAGGAAACGATGCTGATT
GCTAGGAGAGGTATTTGGGATGAGAGAGCCTTAAACATGGCTACGAGATATGGCATTAAT
GCGGTAGAAGTTCGTATTCCTTTCACCACCACATTCAATTTAGAGCAGATTGAAGACGAG
CTGCAGAAGTGGAAACCGACAGCCCTTTTTATTACTCATGGGGATTCTTCAACGGGTACA
GTTCAAAATCTACAGGGATTGGGAAATTTGTGTCACAGATATGGAGCTCTGCTTATAGTG
GATACAGTGGTGTCTATAGGTGGGGTGCCGTTTTTCATGGATGATTGGGGCGTGGATGCA
GTTTATGCCTCATCACAAAAAGCTCTGAGCGGGCCAGCTGGAATATCACCGGTTGCTTTC
AGCAAAAGAGCTGAGATGAAAATAAATAGAAGAAAACACCAACCACCATTTTACTTCGAC
ATCAAGATGTTGGCACAGCAATGGAACTGTTATGGAAATACTCGAGTGTATCACCACACC
ATGTCTCCACCATTAATGTGGGCGCTACGGAGAAGCCTGCAGGAAATCTGCACACGTACG
CTTCCAATGTTTTGGGAACAACATGCAACAATTACTGCACATTTTTGTAAGCGGTTGGAA
CAAAATGGCTTTGAACTGCTCATTCCTAAAGCTGAAGACCGCTTGGCAACAGTTACTACG
GTGATATTACCAAAAGGCTACGATTACAAAGAATATATTACATATATACGGGATAATCAC
AACATCCTACTATTTGGGGGCTTGGGTCCAACAGCGGGCAAGTCTCTGAGAATTGGTATT
ATGGGAGTCAATTGCACTAGAGAAACCGCTGATGCTATTGTAAATGCTATGATAGATGCC
TTGAAGAATCTCAAGAAGTGTTCTTTATGA
Protein sequence:
MLSKKVTVPVPRITDRKVRKLLLCGPGPCNLWPSVTEALTQPILSPLCDEYFRIMEDIRN
GLKYLFQTQTDLVLAISGSGHAGMETVISNLIGPKETMLIARRGIWDERALNMATRYGIN
AVEVRIPFTTTFNLEQIEDELQKWKPTALFITHGDSSTGTVQNLQGLGNLCHRYGALLIV
DTVVSIGGVPFFMDDWGVDAVYASSQKALSGPAGISPVAFSKRAEMKINRRKHQPPFYFD
IKMLAQQWNCYGNTRVYHHTMSPPLMWALRRSLQEICTRTLPMFWEQHATITAHFCKRLE
QNGFELLIPKAEDRLATVTTVILPKGYDYKEYITYIRDNHNILLFGGLGPTAGKSLRIGI
MGVNCTRETADAIVNAMIDALKNLKKCSL