| New model in OGS2.0 | DPOGS201350 |
|---|---|
| Genomic Position | scaffold573:- 43086-45293 |
| See gene structure | |
| CDS Length | 468 |
| Paired RNAseq reads | 7 |
| Single RNAseq reads | 68 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003134 (1e-69) |
| Best Drosophila hit | olig family (1e-36) |
| Best Human hit | class E basic helix-loop-helix protein 22 (5e-31) |
| Best NR hit (blastp) | PREDICTED: similar to Olig family CG5545-PA [Tribolium castaneum] (1e-47) |
| Best NR hit (blastx) | PREDICTED: similar to Olig family CG5545-PA [Tribolium castaneum] (3e-47) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0045449 regulation of transcription |
| InterPro families | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain |
| Orthology group | MCL17130 |
Nucleotide sequence:
ATGCAAGGAGGCCAGCCTCCGCCTCCGCAGCACTGCTATCCGACTGATGAAAACCAACCA
GAACCCGGCACGAGCTACGCTCAAAGACCCCTCGGCGATGGTAAATCGAAACAGAAAATG
CGTCAAGGCAAAAATGTGAGATTGAACATCAATGCAAGAGAAAGACGAAGAATGCACGAT
CTGAATGACGCTTTAGACGAACTACGAGGAGTGATACCGTACGCACACTCGCCGTCCGTG
AGGAAGTTGTCCAAAATAGCTACCCTCCTGCTGGCTAAGAATTATATTCTGATGCAGGCG
AGTGCCCTGGAGGAATTGCGACGGCTAGTTGCATATCTCCAAGGCACCGCTACAGCCGCT
GGTATCGTTCCACCGCCAGGATTCGACCTAGCCGGCATGCCAGCCACCGCCAAGCTTCTT
CAGGGACCGCAACCGGGACCACCAACCGCGCCCGACCCTCCATCTTGA
Protein sequence:
MQGGQPPPPQHCYPTDENQPEPGTSYAQRPLGDGKSKQKMRQGKNVRLNINARERRRMHD
LNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYILMQASALEELRRLVAYLQGTATAA
GIVPPPGFDLAGMPATAKLLQGPQPGPPTAPDPPS