New model in OGS2.0 | DPOGS203417  |
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Genomic Position | scaffold3627:+ 3912-5317 |
See gene structure | |
CDS Length | 1257 |
Paired RNAseq reads   | 118 |
Single RNAseq reads   | 359 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010957 (0.0) |
Best Drosophila hit   | Zyx102EF, isoform C (2e-74) |
Best Human hit | lipoma-preferred partner isoform a (2e-67) |
Best NR hit (blastp)   | PREDICTED: similar to lipoma preferred partner/lpp [Tribolium castaneum] (9e-109) |
Best NR hit (blastx)   | PREDICTED: similar to lipoma preferred partner/lpp [Tribolium castaneum] (1e-107) |
GeneOntology terms    | GO:0005856 cytoskeleton GO:0008270 zinc ion binding |
InterPro families   | IPR001781 Zinc finger, LIM-type |
Orthology group | MCL40587 |
Nucleotide sequence:
ATGAATGCTTTAGATAAACATCTAGCAGATTTACGAATATATGCTAATGAATTGGACGCA
AAATTACAAGATGACATTAATGCATCCAAAGTAAAACCATCGATCCCTCCAAAAAAAAAT
AAAGCTCCTTTGCCCCAAATACCCCAAAGTTACACAGTGAAATCCGCCTGCGAGCCGTCA
TATTCTTCAAGATTAGAAAACGCTAGTCGGACCAGTTCTACATACTCAAATTTGGTACCT
GTAAAGAGTTATATTGTAAGAAATTCGGCTCGTGTCCGAAGCGGTGATGTGCTCTTATAC
AGCAATTTACTGCCACCAGGAGGGACAAATCACGTTTACTCCAATATTCAATCCTCGCGG
AACGTTGAAGGCTTTTACGATCGAGATACTAGGTCCGAATTGTCTAGAAATAGCGACTTA
GGAGCGCAATCAACTTATAGCGAACTACGAAGACCTGGTTCAGTATACCCACCATCTTCG
GCTTCTGTGAACGCTCAAGATTTTTCTACATATGGAGGCTCTCAGACATCTTCAACATAT
GAATCTCTCTATGAACCTATCAACCCACGCCCATGTAGCCAATTGTCGGGAACTTCTTTA
TATGGTGGATATGTTGGCACTGCTGTGGAGCCAATACCAGAACCAGACGATGCTCTTTAT
TGTGGCAATTGCTACAGATGTGGTGAGAAAATTATGGGAGAGACTACCGGTTGTACTGCT
ATGGAAAGAATATATCACATTAAATGCTTCTGCTGTCATCAGTGTGGTATCAATTTGCAG
GGGCGACCATTCTATGCAGTGCAAGGGAAAGCCCTTTGCGAGGTGGATTATTTAGAAACA
CTTGAAAAATGTTGTGTCTGTAATGATCCAATCCTTGACCGAATACTGAGAGCCACCGGC
AAACCATACCACCCGCGCTGCTTCACATGTGTAATGTGCCAGAAGAGTCTAGACGGCATC
CCTTTTACCGTGGATGCAGTGAATCGTATACATTGTATTGAAGACTTTCATAAACGTTAT
GCGCCCCGTTGCGCTCAATGTCGGGAACCAATTATTCCTGAGGGTGGAGCCGAAAAAACT
GTCCGAATTGTTGCATTGGATAAGAGTTTTCATATTGCCTGTTATGCTTGCGAAGATTGT
GGAGCCTCGTTGTGCTCTAGAGACGAAGGCAGTAGATGTTATCCGCTAGACGATCACTTG
TATTGTAAACAATGCAATGCTAGACGTATTCAGGATCTATCAAGAAATATCAATTAA
Protein sequence:
MNALDKHLADLRIYANELDAKLQDDINASKVKPSIPPKKNKAPLPQIPQSYTVKSACEPS
YSSRLENASRTSSTYSNLVPVKSYIVRNSARVRSGDVLLYSNLLPPGGTNHVYSNIQSSR
NVEGFYDRDTRSELSRNSDLGAQSTYSELRRPGSVYPPSSASVNAQDFSTYGGSQTSSTY
ESLYEPINPRPCSQLSGTSLYGGYVGTAVEPIPEPDDALYCGNCYRCGEKIMGETTGCTA
MERIYHIKCFCCHQCGINLQGRPFYAVQGKALCEVDYLETLEKCCVCNDPILDRILRATG
KPYHPRCFTCVMCQKSLDGIPFTVDAVNRIHCIEDFHKRYAPRCAQCREPIIPEGGAEKT
VRIVALDKSFHIACYACEDCGASLCSRDEGSRCYPLDDHLYCKQCNARRIQDLSRNIN