| New model in OGS2.0 | DPOGS203418 |
|---|---|
| Genomic Position | scaffold3627:+ 22132-24522 |
| See gene structure | |
| CDS Length | 2391 |
| Paired RNAseq reads | 1045 |
| Single RNAseq reads | 2708 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010958 (0.0) |
| Best Drosophila hit | Nup107 (9e-79) |
| Best Human hit | nuclear pore complex protein Nup107 (2e-71) |
| Best NR hit (blastp) | PREDICTED: similar to nuclear pore complex protein nup107 [Nasonia vitripennis] (2e-105) |
| Best NR hit (blastx) | PREDICTED: similar to nuclear pore complex protein nup107 [Nasonia vitripennis] (8e-95) |
| GeneOntology terms | GO:0006810 transport GO:0005643 nuclear pore |
| InterPro families | IPR007252 Nuclear pore protein 84/107 |
| Orthology group | MCL14248 |
Nucleotide sequence:
ATGTCACCGATTCTTAACGAAACTTCAATTTTGAAAAACCTTAATGATACTAGTTTGCGG
CATGTCCTGGATGAATCGTCAATGATTGTTAATGCCGGTAATGCAGGAGATGGGTTAAAT
GAAGCATTTTTTGAAATAATACAATCTGGTCGTCCTAGTGAAGTTTTGGATACATTAAAG
AGGTTAGCACAAGTTTGTTGCGACTCACTTGAAGTCGTAGAACCTTGGCATAGATATAAT
GCACAAAATTATTGGCTCGCTGAAGAAGCTAACACATGGAAACTTCTTTACTGCCTCTTT
GCGGATTCAGTTACTGAACATCCCGAGTCGCTGGAGAGTGTCATAGTAGAGCCTACATTG
TCTCAACAAGCTTTAGTGAACGCTTTGTTCCAATGTGACCCGGAACTCCGACTACTACAG
GTGTTAGTGGACTGGTTGGAAGCAACGGCCGCCTATCAGGAAGAAACAACTCAAACTGCT
GCCCCAGTCATTTGTAACAATATACACTGGGGTAACACTCTTCATGAGTTATTGATAGGA
TCGAGTCTGTTCAATAAAGAAAAAAATAAATCCATGGTTACCTGTGTAGATCCAGATGCA
CCAAAACGTCAAAACAAGGTAATCCACTCTGACGATAAAAAGGATGATAATGATCTGTGC
AAGAAAATATTTACGGAAGTTAGATGTGGTAAGTTTGAAGAGGCTGTGTCATTATGTATT
GGCGCCGGACAAGCATGGCGTGGTGCTGTGTTACAAGGCTGGAGATTACTTCACTATGAA
AAGGGAGAAAATGGATGTATCACATTACGTGGGAATGCTTCTAGAGATTTGTGGAAATGG
TGTGCATTAAGTATAGCTAACAATGTCTCGGAGAATATCCACTACAGGGCCACTGTTGGT
ATATTGTGTGGTAACTTACAGAGTGCTGTGTCAGCATGCCAAGGTAACTGGGAAGATTTG
TTGTGGGCTCATTTGAGAGTGCAAATTGAAGCAAGAGTGGACAAGTTCTTACATGAACAT
CATGCGACCGCTGAAGCAAATACTACACCAGCGGACATACTAGATTTATTGCAAAATGAT
CTCCAAATAGAAGAAAAGTCTTTACAACAGGTTTTTAATGCTATGAAGTCTTTAATGGAT
GGAAAGAGAGAGTCCAACTATCAAACATGCCAGCGTTATTTGATGTTAGGTCAAGTTAGA
ACTATCATGCAAGATTCTTTAGAATGGATTGAAAATGGTGAAGATAGATTCGTGAGATTT
CTAGCTCACCTCGTCCTTGTTCTCAGACACATGGGTAAGGATCCACAACATGATATAGGA
GATAAAATTTTGGAGAAATATGTCTCTCAACTCATTTATGGTCTAGTTGAGGGGTCTTGT
GAGTTTCCAGAACTTATAGCATACTATACATCTACTATACCTGGTGATAGACAAATAAAT
TTGTATGCTGAACTCATGGATCAGACATACAAAAGTGAATATAGAGGTAATGTTGTTGAA
GCTGGGATCAAAGCCGGCATTGATGTTGCCGCATCGGCTAGAGCAGCAATTAAAAAAGCT
ATAACAGATATACAGACGGGATATGGAAATGTAGATTCAATATTTACCCAAACATCTGCC
AATGAAAAAGACAAAACACTGATTAATAAAGTCATTTCCTCATTAGAGTGGTTGTCCCTC
ATAGAAAACCAATGTGATGAGGCCCTTTGGTTGAGCAATGCCATGATCAGAACATTTATT
TTTATTGGCAACACTGATGCTGCATTGCTATGTGTATCTAGTATAAGACAGATGTTCGCA
TCGTCGGAATTACGTGAACATCTATGTTTGAAATCATATCTGGAGGCTTTGGAAGCATTT
GCCACTTGGTATAGACATTTCATAAGTGGCCAGCCAAAAGACGTAGAACCTTTAGCCCCA
AATTCATCATTCTCAGATAAGGTACACCATGAACAGAGATGTGCTCAAGTAGAACAACAA
AAAGCAAAATGGAGGAATGCTATATTACACCAATCCCGGCACACTAAAAACCTTCTGTAC
AATGTATTACTGTTTCCCGGAGGTTGGCTGCAAGATGAGAACGACAGTGAAGCCTCACAG
AACTTTACAAAGGAAGACAGAGATGAGAGAACAAAACAATTGGATACACTGAGACGTCTT
TGTATCCCCGAAGTGTGTATTTTAATTCTCAAAATCCTCCAAAGTGGCGATGATGTGGAA
CAACACAAAGAAGCAGTAAAGCTTTGCGACTTGATAGCCGATGACAACCGCGCCCTGTAC
GAAGTTTTCACCAAAAATAAATTGTTCGAAATATTGGATAGGATAAAGGAATCATCTTTA
CTGCTGTTAGAAAAAGGCAGGGATATATTCGGTTACGAATTGAACGAGTGA
Protein sequence:
MSPILNETSILKNLNDTSLRHVLDESSMIVNAGNAGDGLNEAFFEIIQSGRPSEVLDTLK
RLAQVCCDSLEVVEPWHRYNAQNYWLAEEANTWKLLYCLFADSVTEHPESLESVIVEPTL
SQQALVNALFQCDPELRLLQVLVDWLEATAAYQEETTQTAAPVICNNIHWGNTLHELLIG
SSLFNKEKNKSMVTCVDPDAPKRQNKVIHSDDKKDDNDLCKKIFTEVRCGKFEEAVSLCI
GAGQAWRGAVLQGWRLLHYEKGENGCITLRGNASRDLWKWCALSIANNVSENIHYRATVG
ILCGNLQSAVSACQGNWEDLLWAHLRVQIEARVDKFLHEHHATAEANTTPADILDLLQND
LQIEEKSLQQVFNAMKSLMDGKRESNYQTCQRYLMLGQVRTIMQDSLEWIENGEDRFVRF
LAHLVLVLRHMGKDPQHDIGDKILEKYVSQLIYGLVEGSCEFPELIAYYTSTIPGDRQIN
LYAELMDQTYKSEYRGNVVEAGIKAGIDVAASARAAIKKAITDIQTGYGNVDSIFTQTSA
NEKDKTLINKVISSLEWLSLIENQCDEALWLSNAMIRTFIFIGNTDAALLCVSSIRQMFA
SSELREHLCLKSYLEALEAFATWYRHFISGQPKDVEPLAPNSSFSDKVHHEQRCAQVEQQ
KAKWRNAILHQSRHTKNLLYNVLLFPGGWLQDENDSEASQNFTKEDRDERTKQLDTLRRL
CIPEVCILILKILQSGDDVEQHKEAVKLCDLIADDNRALYEVFTKNKLFEILDRIKESSL
LLLEKGRDIFGYELNE