New model in OGS2.0 | DPOGS205819  |
---|---|
Genomic Position | scaffold146:+ 49984-50578 |
See gene structure | |
CDS Length | 429 |
Paired RNAseq reads   | 44 |
Single RNAseq reads   | 280 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009307 (3e-78) |
Best Drosophila hit   | Dim1 (4e-76) |
Best Human hit | thioredoxin-like protein 4A (1e-75) |
Best NR hit (blastp)   | mitosis protein dim1 [Aedes aegypti] (4e-79) |
Best NR hit (blastx)   | mitosis protein dim1 [Aedes aegypti] (2e-79) |
GeneOntology terms    | GO:0030532 small nuclear ribonucleoprotein complex GO:0005682 U5 snRNP GO:0000398 nuclear mRNA splicing, via spliceosome GO:0007067 mitosis GO:0007052 mitotic spindle organization GO:0071011 precatalytic spliceosome |
InterPro families    | IPR012336 Thioredoxin-like fold IPR004123 mRNA splicing factor, thioredoxin-like U5 snRNP IPR012335 Thioredoxin fold |
Orthology group | MCL14435 |
Nucleotide sequence:
ATGAGTTATATGCTAGGACATTTACACAACGGCTGGCAAGTAGACCAAGCTATTTTGTCT
GAAGAAGATCGCGTTGTTGTGATAAGATTTGGCCATGACTGGGATCCTACCTGTATGAAA
ATGGACGAAGTGTTGTATAGTATCGCGGAAAAAGTAAAAAATTTTGCCGTCATCTATCTG
GTGGACATCACCGAGGTTCCAGATTTTAATAAAATGTACGAGTTATACGATCCCTGCACA
GTTATGTTTTTCTTTCGTAACAAACACATTATGATAGATTTGGGCACGGGTAATAACAAT
AAGATCAATTGGCCTCTAGAAGACAAACAGGAGATGATCGACATCATCGAGACGGTGTAT
CGTGGTGCTCGCAAAGGCCGTGGTCTTGTAGTGTCTCCAAAAGACTATTCCACTAAATAC
AGATACTGA
Protein sequence:
MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVY
RGARKGRGLVVSPKDYSTKYRY