| Genomic Position | scaffold223:+ 821-1408 |
|---|---|
| See gene structure | |
| CDS Length | 588 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 0 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013031 (7e-37) |
| Best Drosophila hit | cag (7e-08) |
| Best Human hit | tigger transposable element-derived protein 6 (7e-24) |
| Best NR hit (blastp) | PREDICTED: similar to Tigger transposable element-derived protein 6, partial [Acyrthosiphon pisum] (1e-39) |
| Best NR hit (blastx) | PREDICTED: similar to Tigger transposable element-derived protein 6, partial [Acyrthosiphon pisum] (9e-40) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0045449 regulation of transcription GO:0000775 chromosome, centromeric region GO:0003676 nucleic acid binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR009057 Homeodomain-like IPR006600 Pogo transposase / Cenp-B / PDC2, DNA-binding HTH domain IPR004906 Pogo transposase / Cenp-B / PDC2, subgroup, DNA-binding HTH domain IPR004875 DDE superfamily endonuclease, CENP-B-like IPR012287 Homeodomain-related |
| Orthology group | MCL40806 |
Nucleotide sequence:
ACTATAAAGTCTGAGTGCTCTGATGGACATAGAAATATTAAGAGGGCTAGAGTAACTGAA
TTCCCTCATATTGAAAAGTGCCTTTTGGAATGGATAAAACAAACTCTTGACAAGAACATT
CCCTTAGATGGACTTTTGTTGAAAGAAAAATCAAAAGAGATTGCTACAAAACTGGGAATC
CAGAACTTTTCTGCTAGCAACGGCTGGTTAGAGGGTTCTAAAAGGCGTCATGATATAGCT
TTCAAAAAAGCAGCTGGGGAAAGTAAATCTGTGGACCAAGGTGTGTGCAATCACTGGGCT
AAAGATCTGCTAAATCTTTTAGAAGGGAATGAACCAGACGATATTTACAACGCGGATGAA
ACGGCTTTGTTTTTCAAGCTCCTTCCGGATAAAACATTTACGTTTAAAGGCGAAAAATGC
CATGGAGGAAAACAAAGCAAGGAACGCCTTATTTCTCCAGTGTGTAAACATGAGTGGTAC
GCACAAACCCCACTTCTCATCATCGGGAAATCAAAACGACATAGATGTTTTAAAGGTGTC
AAGACTCTACCCGTTGATTATGCCCCACTAGTAGACTTCAACCATTAG
Protein sequence:
TIKSECSDGHRNIKRARVTEFPHIEKCLLEWIKQTLDKNIPLDGLLLKEKSKEIATKLGI
QNFSASNGWLEGSKRRHDIAFKKAAGESKSVDQGVCNHWAKDLLNLLEGNEPDDIYNADE
TALFFKLLPDKTFTFKGEKCHGGKQSKERLISPVCKHEWYAQTPLLIIGKSKRHRCFKGV
KTLPVDYAPLVDFNH