| New model in OGS2.0 | DPOGS205416 |
|---|---|
| Genomic Position | scaffold223:+ 43863-47306 |
| See gene structure | |
| CDS Length | 468 |
| Paired RNAseq reads | 104 |
| Single RNAseq reads | 7028 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001585 (9e-70) |
| Best Drosophila hit | tropomyosin 1, isoform L (5e-29) |
| Best Human hit | tropomyosin alpha-1 chain isoform 1 (3e-18) |
| Best NR hit (blastp) | tropomyosin-2 isoform 3 [Bombyx mori] (2e-46) |
| Best NR hit (blastx) | GF11453 [Drosophila ananassae] (1e-53) |
| GeneOntology terms | GO:0005515 protein binding GO:0005737 cytoplasm GO:0007015 actin filament organization GO:0009790 embryo development GO:0034609 spicule insertion GO:0040011 locomotion GO:0051015 actin filament binding |
| InterPro families | IPR000533 Tropomyosin |
| Orthology group | MCL11056 |
Nucleotide sequence:
ATGGAGACGGACCTCGAGCGGGCCGAGGAGAGGGCGGAGCAGAGCGAGTGCAAAATCGTC
GAGCTTGAGGAGGAGCTCCGCGTTGTCGGCAACAACCTGAAATCCCTCGAAGTCTCCGAA
GAGAAGGCCAACCAACGCGAAGAGGAGTACAAAAACCAGATCAAAACTCTCACCACCCGT
CTAAAGGAGGCGACGCAAAGGGAAGAGACATACGAGGGTCAGGTGAAGCTGCTCGACGCA
CAGCTCAAAGAGGCGATGGCGTCCCGTGATCACGTCGAGGATAAGATACACAGCCTCACG
CAGAAACTCACGCAAGCTGAGGCTCGCGCTGAGTTCGCTGAGCGCTCTGTCCAGAAACTG
CAAAAGGAGGTCGACAGGCTTGAAGACGACCTGGTGGCCGAGCGCGAAAAGAGCAAAATC
CTTCAGGAGGAGATGGAGGCCACGCTCCACGACATCCAGAACATGTGA
Protein sequence:
METDLERAEERAEQSECKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTR
LKEATQREETYEGQVKLLDAQLKEAMASRDHVEDKIHSLTQKLTQAEARAEFAERSVQKL
QKEVDRLEDDLVAEREKSKILQEEMEATLHDIQNM