| New model in OGS2.0 | DPOGS205419 |
|---|---|
| Genomic Position | scaffold223:+ 55677-58006 |
| See gene structure | |
| CDS Length | 855 |
| Paired RNAseq reads | 12222 |
| Single RNAseq reads | 71775 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001587 (1e-124) |
| Best Drosophila hit | tropomyosin 2, isoform C (5e-117) |
| Best Human hit | tropomyosin alpha-1 chain isoform 1 (3e-52) |
| Best NR hit (blastp) | tropomyosin-1 [Bombyx mori] (1e-136) |
| Best NR hit (blastx) | tropomyosin-1 [Bombyx mori] (3e-129) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR000533 Tropomyosin |
| Orthology group | MCL11960 |
Nucleotide sequence:
ATGGACGCGATCAAGAAGAAGATGCAGGCGATGAAGCTGGAGAAGGATAATGCCATGGAC
AAGGCAGATACCTGCGAACAGCAGGCCAGGGATGCCAACCTCCGCGCCGAGAAGGTCAAC
GAGGAAGTCCGTGAGCTCCAGAAGAAGCTCGCCCAAGTCGAGGAGGACCTCGTCCTTAAC
AAGAACAAACTGGAGCAAGCCAACAAGGACCTGGAAGAGAAAGAGAAGCAACTGACCGCC
ACCGAGGCGGAGGTGGCCGCCCTCAACAGGAAGGTGCAGCAGATTGAAGAGGACCTCGAA
AAGTCCGAGGAGAGGTCCGGCACCGCCCAGCAGAAACTGCTCGAGGCCCAGCAGTCTGCT
GACGAAAACAACCGTATGTGCAAAGTATTGGAGAACAGGGCACAACAGGACGAGGAGCGT
ATGGACCAGCTCACCAACCAACTCAAGGAAGCTCGTCTTCTCGCTGAGGACGCCGACGGT
AAATCTGATGAGGTTTCACGCAAGTTAGCCTTCGTTGAAGACGAACTTGAAGTCGCTGAG
GACCGTGTCAAGTCTGGTGACGCAAAGATCTCAGAACTTGAGGAAGAATTGAAGGTTGTA
GGTAACTCCCTTAAATCACTTGAAGTATCAGAAGAGAAGGCCAACCAGCGCGTAGAAGAA
TTCAAAAAGCAGCTTAAGACCCTGACCTCCAAACTCAAGGAAGCCGAGGCCCGCGCTGAG
TACGCCGAGAAGACTGTGAAGAAACTGCAGAAGGAAGTCGACAGGCTTGAAGACGCTTTG
TTCAACGAGAAGGAGAAATACAAGGCGATATGCGATGACTTGGACGGCACATTCGCCGAG
CTCACCGGATACTAA
Protein sequence:
MDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLVLN
KNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSA
DENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAE
DRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEEFKKQLKTLTSKLKEAEARAE
YAEKTVKKLQKEVDRLEDALFNEKEKYKAICDDLDGTFAELTGY