New model in OGS2.0 | DPOGS205420  |
---|---|
Genomic Position | scaffold223:+ 59336-76503 |
See gene structure | |
CDS Length | 1302 |
Paired RNAseq reads   | 319 |
Single RNAseq reads   | 1008 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001589 (6e-133) |
Best Drosophila hit   | synaptotagmin 4 (6e-103) |
Best Human hit | synaptotagmin-11 (5e-71) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP001800-PA [Tribolium castaneum] (4e-131) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP001800-PA [Tribolium castaneum] (1e-113) |
GeneOntology terms    | GO:0005886 plasma membrane GO:0007269 neurotransmitter secretion GO:0005544 calcium-dependent phospholipid binding GO:0016192 vesicle-mediated transport GO:0016079 synaptic vesicle exocytosis GO:0008021 synaptic vesicle GO:0005215 transporter activity GO:0016020 membrane GO:0048167 regulation of synaptic plasticity GO:0044456 synapse part GO:0046928 regulation of neurotransmitter secretion |
InterPro families    | IPR008973 C2 calcium/lipid-binding domain, CaLB IPR018029 C2 membrane targeting protein IPR001565 Synaptotagmin IPR020477 C2 region IPR000008 C2 calcium-dependent membrane targeting |
Orthology group | MCL12017 |
Nucleotide sequence:
ATGAAGATGCTGTCACCTCATGATGGACCAGATATCTCGCCAGTCGAGTCCGCTGGTGAA
TGGCACAGCCCCACATTCTGGGTGCTGGTGGTTGGAGCGTCAGCGCTGGTTGCTGTCGTG
ATTGCTGTGGTCGCTTGCTGGGTCGCTCGCAGACGGGCATCGCTTGCTCACAAACTTGGT
GGTAAGCGTGGTCCGGACAAGGCGTTGGTCTTCCAACCTCCGCGCCGAGCGACCGCTGTT
CGCTCTCCTGGCTCCGCTACCCATTATCTTCGCAAGTCACCCTCACCAACGGCCGCCGCA
CCCCCAGCGTCTTCCCCGCCTCAGCCGCAACCACCAGCTACAGTCGTTGTTGCGTCGGGC
GGCAACAGCCCTCATACTCCAACTGCCCCTGAACCAGCTCCTCTCAGCAAGGAGTTAGCT
GATGCCAACGCCACTGAGAAGCCCAAGCCTTCCGAACCAGAGAGCAACAACAGCAGCCTC
GGAGATTTGCACTTTAAACTGAGACATGACAATGAGAAGAGCGCTCTGGTTGTGTCCGTG
GTGTCCTGCCAGGGTCTCCCAGGTCGTGAGCCAGCTGGGCCCGACCCTTACGTGAAGCTG
CAACTTCTGCCGGACAAACAGCACAAAGTTAAGACCAGGGTTGTCCGAAAGACCCGTTGT
CCAGTCTACGATGAAGACTTCACCTTCTACGGTATCGCTCCACATGAACTCGCTTCCATC
ACCCTACACTTTGTAGTCCTCAGTTTTGACAGATACTCCCGCGATGAGATCATCGGAGAA
GTCGTGGCACCGCTGTCAGCTCTTCAACTGCAGTCCGGAGAGGCCATGGCCCTCTGCCGC
GAAATACAGCCAAGAAGTTTGAAGATGCGTTCCGTTGGTCGTGGTGAAGTGCTGGTGTCT
TTGTGCTGGCAGCCAGCTGCAGCCCGTCTGACCGTAGTACTCCTGAAGGCTCGCAATCTG
CCAAAGATGGACGTCACAGGACTCGCTGATCCTTATGTAAAGATGTATCTGCTGTACAAC
GGTCAACGCATCGCCAAGAAGAAAACTCATGTAAAGAAGCGCACTCTGAATCCAGTTTTC
AACGAGTCTTTCGTCTTTGAAGTGCCGGCTGCTCCTAACGCCACGCTCGACCACGTCTCT
CTGGAACTGCTGGTCCTCGACTGGGATAGGGTCACTAAGAACGAGGTGATCGGACGGTTG
GAACTTGGTTCGGAAGGTGTCGGAAGCGCACGACACCACTGGCGCGAGGTGCAGGCGGCC
CCACGACGACAGATCGCCGACTGGCACAAACTCAAGGAGTGA
Protein sequence:
MKMLSPHDGPDISPVESAGEWHSPTFWVLVVGASALVAVVIAVVACWVARRRASLAHKLG
GKRGPDKALVFQPPRRATAVRSPGSATHYLRKSPSPTAAAPPASSPPQPQPPATVVVASG
GNSPHTPTAPEPAPLSKELADANATEKPKPSEPESNNSSLGDLHFKLRHDNEKSALVVSV
VSCQGLPGREPAGPDPYVKLQLLPDKQHKVKTRVVRKTRCPVYDEDFTFYGIAPHELASI
TLHFVVLSFDRYSRDEIIGEVVAPLSALQLQSGEAMALCREIQPRSLKMRSVGRGEVLVS
LCWQPAAARLTVVLLKARNLPKMDVTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVF
NESFVFEVPAAPNATLDHVSLELLVLDWDRVTKNEVIGRLELGSEGVGSARHHWREVQAA
PRRQIADWHKLKE