New model in OGS2.0 | DPOGS202840  |
---|---|
Genomic Position | scaffold3180:+ 21292-26318 |
See gene structure | |
CDS Length | 873 |
Paired RNAseq reads   | 6060 |
Single RNAseq reads   | 17722 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010482 (1e-19) |
Best Drosophila hit   | cuticular protein 97Eb (8e-36) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-1 motif 55 [Bombyx mori] (1e-82) |
Best NR hit (blastx)   | cuticular protein RR-1 motif 55 [Bombyx mori] (9e-83) |
GeneOntology terms   | GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL15130 |
Nucleotide sequence:
ATGTTTGCTATTAAGGCGCTTCTGATCAGCGCGGCGTGCGCGTGCGCATATTCGCAGTCC
CACGGGCCAACAACGACGCCGGTGCCGATCCTGAAACAGATAAACAGGCAGAACGACGAC
GGCTCATACAGCTTCGGCTATGAAGCAGCAGACGGATCCTTCAAGATAGAAACCAAATAT
CCCAACGGGGATGTAGCCGGGAAGTACGGATACTTAGACGACACGGGGAAACTGAGGGAG
GTGTCCTACGGAGCGAGCAGTCAGAGAGGATTCGAACCGGAAGGCACCGGAATTATGGTT
CCCCCACCGACCTTAAACGACCCGAAGACCAGCGCTTTGGCCGATGGCCAGGAAGACGAT
GGACAATACCGTGAGGATCCTCGCATTTACGAGGACCAGAAGTACAACGGGAGACAAGCG
AGGCCGAGCTCCATCAGACAGTACCAGCCAGAGAGGCAGCAGTTCACGTCCAGCTATAGC
TCACAGCCACAACAAGAAAGCGTATATCAGCCACAACCAGCGTACCAGCAGCAGCGAGCC
TACCAGCCAGCTTACCAGCAACAACCATCCCCACAACCACAATACCAGCCACAGCCACAA
AGACCTCTATTCTCCCAACAGACCAATCTCTTCAACCAAGCTCCACAAACATTCCCTCAA
TCAGACTTGCGGCCTCAGAGCCAGGTGTATCACCAACAACCCCAGTTCTCATACCAGGCG
TACACCCCCCAGCCCTACCAGAACTACCAGTCCCAGGGCTACCAGTCCCAGAACTACCAG
AATCCACACCAGAACTTCAACCCGTTCTCGGGACACCCCGCCCAAAACTTCGATCCCAAC
ACAGGCTCATATTCCATCAACTTCACTGGCTAA
Protein sequence:
MFAIKALLISAACACAYSQSHGPTTTPVPILKQINRQNDDGSYSFGYEAADGSFKIETKY
PNGDVAGKYGYLDDTGKLREVSYGASSQRGFEPEGTGIMVPPPTLNDPKTSALADGQEDD
GQYREDPRIYEDQKYNGRQARPSSIRQYQPERQQFTSSYSSQPQQESVYQPQPAYQQQRA
YQPAYQQQPSPQPQYQPQPQRPLFSQQTNLFNQAPQTFPQSDLRPQSQVYHQQPQFSYQA
YTPQPYQNYQSQGYQSQNYQNPHQNFNPFSGHPAQNFDPNTGSYSINFTG