| New model in OGS2.0 | DPOGS215742 |
|---|---|
| Genomic Position | scaffold442:- 66551-69164 |
| See gene structure | |
| CDS Length | 1464 |
| Paired RNAseq reads | 486 |
| Single RNAseq reads | 1158 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003618 (0.0) |
| Best Drosophila hit | photorepair, isoform A (1e-164) |
| Best Human hit | ND |
| Best NR hit (blastp) | DNA photolyase [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | DNA photolyase [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0006281 DNA repair GO:0003904 deoxyribodipyrimidine photo-lyase activity |
| InterPro families | IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal IPR006050 DNA photolyase, N-terminal IPR008148 DNA photolyase, class 2 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold |
| Orthology group | MCL18379 |
Nucleotide sequence:
ATGAAACAAATACATAAAAAGCGAGAAGAAACTGCTAAGTCCATTTTAGATTTTAACTTC
AATAAGTCTCGTTTAAGAATAATATCACAAGAGCAGATGGTATCTGATGATTGCGAAGGA
ATTGTATATTGGATGTCGAGAGACAGCAGAGTTCAAGACAATTGGGCTTTTCTATACGCA
CAGGAACTGGCGTTAAAAAATAAAGTACCGCTCCATGTATGTTTCTGTTTAATAGCAAAA
TATTTGGATGCATCTGTTAGACAATTTCACTTTCTTATCAAAGGTCTCGAAAAAGTTGCT
GCTGATTGTGACAAGCTTAACATTTCATTTCACTTACTGGAAGGCAATGGTGCAGAAGTT
TTACCTCAATGGGTTATCGATCACAGGATAGGGGCTGTGGTTTGTGATTTCAATCCTCTA
AGAGTGCCATTAGGCTGGGTCGAGGGGGCAAAGAAAAAATTAAAAAAGGATGTGCCATTA
ATTCAGGTTGATGCCCATAATGTTGTGCCGTGTTGGGTGGCATCTAACAAACAGGAGTAT
TCCGCTAGAACCATAAGAAATAAGATCAACTCAAAACTTGATGAATACCTGACCGAGTTT
CCTCCGGTTATTAAACATCCACATTCAAGCAGTTTTAAACCAGAGCCAATAGATTGGGAT
AAGGCGATAGAGACGAGAGAAGCAGACAAATCTGTCGGTCCAATAGGATGGGCGGGTCCT
GGCTATGACAATGCTGTCAAAACATTGAAGAGTTTTCTTGACAAACGTCTCAAAGTCTTT
GCAACCAAAAGGAATGATCCCACTCAGGATGCACTTAGCAATTTATCACCATGGTTTCAT
TTTGGTCAAATATCAGCACAACGGGTAGCCTTGTGTGTGAAGGAGTACAAAACCAAGTAT
ACAGAGAGCGTCAATTCTTATTTAGAAGAGGCTATAGTGCGAAGAGAATTGGCTGACAAT
TTTTGTTTTTACTGTGAACATTATGATAGCATCAAAGGTGCGAGCCAGTGGGCACAGAAG
ACTTTAGACGACCATAGAAATGACAAAAGAACACATATATATACACTTGAACAGTTCTGC
AAAGCAGAAACCCATGACGACCTGTGGAACTCGGCTCAAATACAAATGGTTAAAGAGGGG
AAGATGCATGGGTTTCTAAGAATGTACTGGTGTAAGAAGATCCTAGAGTGGACCTCGAGT
CCGGAAGAGGCATTGAAATATGCCATATATTTGAACGATCATTACAGTGTTGACGGCAGG
GACCCTAGCGGATATGTTGGTTGTATGTGGTCTATCTGCGGCGTCCACGACCAGGGCTGG
GCGGAGCGTGCTGTGTTTGGCAAAATCCGTTTCATGAACTATGACGGCTGCAAACGAAAG
TTTAACGTACCAGCCTTCGTATGCAGATACGGAGGGAAAGTCCACAAATATAACAACTTG
ACCGACAAACAGAAGAAAAAGTAG
Protein sequence:
MKQIHKKREETAKSILDFNFNKSRLRIISQEQMVSDDCEGIVYWMSRDSRVQDNWAFLYA
QELALKNKVPLHVCFCLIAKYLDASVRQFHFLIKGLEKVAADCDKLNISFHLLEGNGAEV
LPQWVIDHRIGAVVCDFNPLRVPLGWVEGAKKKLKKDVPLIQVDAHNVVPCWVASNKQEY
SARTIRNKINSKLDEYLTEFPPVIKHPHSSSFKPEPIDWDKAIETREADKSVGPIGWAGP
GYDNAVKTLKSFLDKRLKVFATKRNDPTQDALSNLSPWFHFGQISAQRVALCVKEYKTKY
TESVNSYLEEAIVRRELADNFCFYCEHYDSIKGASQWAQKTLDDHRNDKRTHIYTLEQFC
KAETHDDLWNSAQIQMVKEGKMHGFLRMYWCKKILEWTSSPEEALKYAIYLNDHYSVDGR
DPSGYVGCMWSICGVHDQGWAERAVFGKIRFMNYDGCKRKFNVPAFVCRYGGKVHKYNNL
TDKQKKK