New model in OGS2.0 | DPOGS208777  |
---|---|
Genomic Position | scaffold1840:- 1472-11944 |
See gene structure | |
CDS Length | 2667 |
Paired RNAseq reads   | 1030 |
Single RNAseq reads   | 2551 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007636 (0.0) |
Best Drosophila hit   | vav, isoform A (0.0) |
Best Human hit | guanine nucleotide exchange factor VAV2 isoform 2 (9e-105) |
Best NR hit (blastp)   | PREDICTED: similar to vav CG7893-PA, isoform A [Apis mellifera] (0.0) |
Best NR hit (blastx)   | GJ18997 [Drosophila virilis] (0.0) |
GeneOntology terms    | GO:0005085 guanyl-nucleotide exchange factor activity GO:0019992 diacylglycerol binding GO:0007266 Rho protein signal transduction GO:0005100 Rho GTPase activator activity GO:0007155 cell adhesion GO:0008360 regulation of cell shape GO:0007015 actin filament organization GO:0005515 protein binding GO:0035023 regulation of Rho protein signal transduction GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0005622 intracellular |
InterPro families    | IPR001715 Calponin homology domain IPR000219 Dbl homology (DH) domain IPR001849 Pleckstrin homology domain IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol binding IPR000980 SH2 motif IPR001452 Src homology-3 domain IPR022613 Calmodulin-regulated spectrin-associated protein, CH domain IPR011993 Pleckstrin homology-type |
Orthology group | MCL10723 |
Nucleotide sequence:
ATGGCTGCCGGTGGAGAGGATCTTTGGCGCGAGTGCGCAACTTGGCTCACTCGATGTGGC
TTGTTACGGCCTGATCATAAAGCAAATTGGGAGACGAGTACTATCCATGATCTTGCTTAT
ACTTTACGAGATGGTGTGCTGCTTTGTAATTTGTTAAACACGCTGTACCCGGGATGTATC
GACATGAAAGATGTTAATCAACGACCCCAGATGGCACAGTTCCTATGTATGAGAAACATT
AAAGTCTTCCTGAGGACATGCCACGAAGTGTTTGAGCTTCGGGAGACGGATCTCTTTGAT
CCTTCGATGTTATTCGACCTCTCCGATTTTCACAGGGTGTTATGTACCTTGGCCAAGCTC
AGTCAATGTCCTAAAGCCTTGGCTAGAAATGTTCAGCCGTTCTCAGCGAGACGGACTCAG
TCGGAGGAGGACATCTACAAGGACCTTCAGTCGGTTGGCGGAACGGGCCGTGGGGTGGGG
GAGTACGCCAGCTACTGCGCCCGCCTTCACGACGAGGAGATCTACCACGACCTGTGCGTG
GTGACAGGGGCAAGGGGCGCGCCCGCCGACAAACACAACATCGCTTTCGCTACACTAGCG
ACGTCGTCGCACAGCTTAGAGAAGAGAGATTACGTTATACGGGAACTGGTCGACACTGAG
TGTAACTATGTGGATGTGCTCAGTAAGATTATCAAATACTTCTTGAGGCCGCTGACGCCG
TATCTGAAGCCCCAGGATATGCAAGTCATATTTTTCGGTGTCAAGGAGTTGCACGATATA
CACAACGGTCTACTCCGCCAGCTAAGGCTCGCGACCGACAATTGTGTACCTGGCAGCGGA
GCGCCGCGACTAGCGGACGTGTTCCTGGCGTGGCGGGAGCGGCTCCTGCTGTATGGAGAC
TATTGCTCAAATCTCACAAACGCCCAGGACACGTTGAAAGCGCTCGATGCAAGGGATTCC
ACATTCAGTAAGCAGCTACTGAAATGTCAAAAGGAGCACAGTGACGGTCGTATCCAGCTG
CGCGACATCCTGTCGGTTCCCATGCAGCGTGTGCTCAAGTATCATCTGCTGCTGGACAAG
CTGGTGCACGAGACCCAGCCGAACCACGAGGAGTTCCGCGGCTTGGAGCGCGCCAAGGAA
GCCATGGTGGACGTGGCTCAGTATATCAACGAGGTCAAGAGGGACAGCGAGGTGCTCGTG
TTGCTGGCTAAGCTGCAGGAGAGTATAGTGGACTGGGACCGGTCGGGCGCGGAGGGCGGG
TCGCTGGCAGCTTACGGCCGCCTGCTGCTGGACGGAGAGCTGAAGGTGAAGGCTCACGAG
GACCAGAAGATGAGGATGAGATACGTGTTCGTGTTCGACAAGTACATGCTGCTGTGCAAG
CCCGTCAAGGAGAACCAGTACTCGTACCGGAAGGGCATCAAGCTGGCCGAGTACCGTGTG
GAGGAGGGCGGGCCGCGGCGCTCGCTGAGGGCGGACGCTCGCTGGACCGCGCACTTCTTC
CTCGTCAGGCGGACCAAGGACGCCACCTACACGCTTTACGCCAAGACGGAGGACTGTCGC
CGGAAATGGCTGAAGGCCATCAACGACGCCATAGAGAATCTGGAGCCGCCCGGCTGTCGG
CGGACCAACCACAAGTTCGTTCTTCACACCTTCGAGAAGCCGGCCACGTGTCATCACTGC
TCCAAGTTCCTCAAGGGCAGGATATTTCAGGGCTACCTGTGTTCCGTGTGTGGAGCGTGC
GCCCACAAGGAGTGCATCGCTCTGTCGGGCCGCTGCGGGGGAGGGAGCGCCCCCGCGCCG
CCTCTGCCACCACACGCACTACAACCGGACACCGCGCTGCACTACTACATGTGGTACGTG
GGCGAGATGAGCCGGGAGACGGCCACGTCCCGCCTGGAGCGCCGTGTGGACGGCACCTTC
CTGCTGCGGGTGAGGCCGCGCGCCGCGCTCCACGACACCCAGTACGCGCTCTCACTCAAA
ACCGACAACACGGTGAAACACATGCGAGTGTGTCTGAAGCCCATCGACTCGGTGCCTCAC
TACTACCTGTCCGAGTCCAGGTTCTTCAGGAGCGTGGTCGAGCTGATATCCTACTACGAG
AAGACGAGCTTGTCGGAGAACTTTGTCGGATTAAACTCGAACTTGCGATGGCCCTTCCGC
CGCGTGGTGGCGACTGTCATCCACGACTTCCGACCGCTAGAGGCATCCCAGTTGGCGCTC
CGCCCCGGCGCGAAGGTGTTAGTGCTCAGCAAGGAAGGCGACGGCCGGGGCTGGTGGAAA
GGCCGCACGCTGGATAAGGGTGACCACCGCTCGGGCTACTTCCCCAAGGAGTGCGTCCGC
GAGGAGCCCGAGTCTGTGCCTCGCCGAGCGCGAGCTTCACTACCTGTCACACGACACACG
CGGAGCCCGAGCGACCCGAGCGCTCGCCCTCGGGCCGCCGGAGGAGCCCCTCTCGCCGGA
CTCCATGGAAGACCTCGTCTGAATCACAATACACATACATACAGAGAAAAACCTAAACAC
CATCACACTGGGGATGGAGAATCAGATGATTATATTTTACTGGTTGAAATTCCTGAATTG
ATTACACATCAGCAGAGGTCTCGTCTGTCCGAACCCATGGCACCAGTCGACACTGTGAAC
GAATACTCACTAAGGTATGATGGTTAG
Protein sequence:
MAAGGEDLWRECATWLTRCGLLRPDHKANWETSTIHDLAYTLRDGVLLCNLLNTLYPGCI
DMKDVNQRPQMAQFLCMRNIKVFLRTCHEVFELRETDLFDPSMLFDLSDFHRVLCTLAKL
SQCPKALARNVQPFSARRTQSEEDIYKDLQSVGGTGRGVGEYASYCARLHDEEIYHDLCV
VTGARGAPADKHNIAFATLATSSHSLEKRDYVIRELVDTECNYVDVLSKIIKYFLRPLTP
YLKPQDMQVIFFGVKELHDIHNGLLRQLRLATDNCVPGSGAPRLADVFLAWRERLLLYGD
YCSNLTNAQDTLKALDARDSTFSKQLLKCQKEHSDGRIQLRDILSVPMQRVLKYHLLLDK
LVHETQPNHEEFRGLERAKEAMVDVAQYINEVKRDSEVLVLLAKLQESIVDWDRSGAEGG
SLAAYGRLLLDGELKVKAHEDQKMRMRYVFVFDKYMLLCKPVKENQYSYRKGIKLAEYRV
EEGGPRRSLRADARWTAHFFLVRRTKDATYTLYAKTEDCRRKWLKAINDAIENLEPPGCR
RTNHKFVLHTFEKPATCHHCSKFLKGRIFQGYLCSVCGACAHKECIALSGRCGGGSAPAP
PLPPHALQPDTALHYYMWYVGEMSRETATSRLERRVDGTFLLRVRPRAALHDTQYALSLK
TDNTVKHMRVCLKPIDSVPHYYLSESRFFRSVVELISYYEKTSLSENFVGLNSNLRWPFR
RVVATVIHDFRPLEASQLALRPGAKVLVLSKEGDGRGWWKGRTLDKGDHRSGYFPKECVR
EEPESVPRRARASLPVTRHTRSPSDPSARPRAAGGAPLAGLHGRPRLNHNTHTYREKPKH
HHTGDGESDDYILLVEIPELITHQQRSRLSEPMAPVDTVNEYSLRYDG