| New model in OGS2.0 | DPOGS208842 |
|---|---|
| Genomic Position | scaffold1840:+ 14540-31237 |
| See gene structure | |
| CDS Length | 7251 |
| Paired RNAseq reads | 20123 |
| Single RNAseq reads | 47594 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007948 (0.0) |
| Best Drosophila hit | alpha spectrin (0.0) |
| Best Human hit | spectrin alpha chain, brain isoform 3 (0.0) |
| Best NR hit (blastp) | Spectrin alpha chain, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | Spectrin alpha chain, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0002168 instar larval development GO:0007308 oocyte construction GO:0007294 germarium-derived oocyte fate determination GO:0045170 spectrosome GO:0008302 female germline ring canal formation, actin assembly GO:0045169 fusome GO:0030727 germarium-derived female germ-line cyst formation GO:0005886 plasma membrane GO:0007417 central nervous system development GO:0045478 fusome organization GO:0048134 germ-line cyst formation GO:0005516 calmodulin binding GO:0008360 regulation of cell shape GO:0016337 cell-cell adhesion GO:0008091 spectrin GO:0003779 actin binding GO:0030707 ovarian follicle cell development GO:0005938 cell cortex GO:0005794 Golgi apparatus GO:0008017 microtubule binding GO:0007009 plasma membrane organization GO:0008092 cytoskeletal protein binding GO:0030721 spectrosome organization GO:0007274 neuromuscular synaptic transmission GO:0007010 cytoskeleton organization GO:0005856 cytoskeleton GO:0005509 calcium ion binding GO:0050807 regulation of synapse organization GO:0007026 negative regulation of microtubule depolymerization GO:0042062 long-term strengthening of neuromuscular junction GO:0016199 axon midline choice point recognition GO:0048790 maintenance of presynaptic active zone structure GO:0005811 lipid particle GO:0031594 neuromuscular junction GO:0016323 basolateral plasma membrane |
| InterPro families | IPR018159 Spectrin/alpha-actinin IPR001452 Src homology-3 domain IPR002048 Calcium-binding EF-hand IPR002017 Spectrin repeat IPR014837 EF-hand, Ca insensitive IPR018247 EF-Hand 1, calcium-binding site IPR011992 EF-hand-like domain IPR018249 EF-HAND 2 IPR013315 Spectrin alpha chain, SH3 domain |
| Orthology group | MCL10080 |
Nucleotide sequence:
ATGGAGCAGATCCCACCCCCCAAGGAGGTGAAGATCTTGGAGACTGCAGAGGACATTCAA
GAACGACGTGAACAGGTTCTCAATCGCTATGAAGATTTCAAACAAGAAGCACGCGCTAAG
CGTGAAAAGTTGGAAGACTCTCGTCGCTTCCAGTACTTCAAACGTGACGCCGACGAGTTG
GAGTCCTGGATACAGGAGAAGCTGCAAGCTGCTAGTGATGAGAGCTACAAAGATCCTACT
AACTTGCAAGCTAAGATCCAAAAACATCAAGCTTTCGAGGCCGAAGTAGCAGCGCACTCT
AACGCGATCGTAGTCCTCGACAACACTGGCAGTGAAATGATATCTGCTGGACACTTCGCT
TCTGAGACTATTCGCAAGAGGCTGGATGAACTTCACCGTCTATGGGAGCTGCTGCTCTCC
CGTCTCGCCGAAAAGGGCATGAAGTTGCAACAGGCCCTGGTGCTGGTGCAGTTCCTTCGT
CACTGTGATGAAGTCATGTTCTGGATACATGACAAGGAGACATTCGTGTGTGCCGATGAG
TTCGGTTCGGACTTGGAGCACGTGGAGGTTCTGCAGCGCAAATTCGACGAGTTCCAGAAG
GATATGGCGGCGCAGGAGTATCGCGTCACCGAGGTCAACCAGCTCGCTGAAAGGCTCGTG
CTCGAAGGACATCCCGAGCGAGAGACTATTGTGAAGAGAAAGGATGAGCTGAACGAGGCC
TGGCAGCGTCTTCGTCAGATGGCACTAATGCGTCAGGAGCGTCTATTTGGAGCGCACGAG
ATTCAGCGCTTCAACCGTGACGCAGACGAGACCATTGCCTGGATCTCAGAGAAGGATGTC
GTTCTCGGATCTGATGATCATGGCCGTGACCTGGCTACCGTCCAAACCTTGCAGCGGAAA
CACGAGGGCGTGGAGCGCGATCTGGCAGCTCTGGAAGACAAGGTCACCACTTTGGACGGA
GAAGCCGCCCGACTCGCCGCTATTCACGCCGACCACGCACCCGCCATACATGGCAAACGA
GATGAAATCGCTAACGCCTGGCAAAGACTGGTCCAGAAGGCTCAGGAACGTCGTACCGAG
CTCGAATCATCCTACGCACTCCATCGCTTCCTGGCCGACTACCGCGACTTGATTTCGTGG
ATGAGCGACATCCGCGCGCTTATTGCAGCTGATGACCTTGCGAAGGACGTTCCTGGGGCC
GAGGCCTTGCTGGAGAGACATCAGGAGCACAAGGGTGAAATGGACGCGCGTGAAGACGTA
ATGAACGCTTGCGCGTCTAGTGGAGAAGCGCTGGTAGCCGCTGGACACCGCGGCTCAGCT
GAAGTACGTACGGCACTGGAGGCTCTTCAACGTGATAGAGAAGCGCTGAACGCGCTGTGG
GAACAGCGCAGAGTTCTGTACCTACAGTGTATGGATCTGCAGCTTTTCTATAGAGACACG
GAACAAGCTGACACCTGGATGCACAAACAGGAGGCTTTCCTTGCTAACGAAGATGTTGGC
GATTCTTTGGATTCAGTGGAGGCTCTGCTAAAGAAACATGAAGATTTTGAGAAGTCTCTC
GCCGCCCAGGAAGAAAAGATCAAGGCCTTAGACGAATTCGCTACTAAACTCATTGAAGGT
CAACACTATGCCGCCGACGACGTAGCCCAGAGGAGAGAGATGCTCCTTGAGCGTCGCGCC
GCCTTGCTGGAGAAGTCGAGTCAGCGTCGCGCGTTGCTCGAGGACGCCTATAAGTACCAG
CAGTTCGAACGCGACTGTGACGAGACTAAAGGCTGGATCAACGAGAAGCTCAAGTTTGCC
ACCGATGATAATTATCTAGACCCCACCAACCTGAACGGTAAAGTGCAAAAACACCAAAAC
TTCGAACAGGAACTGTTGGCAAATAAACCTCGCGTGGACGAGATCAACGCTCTGGGGAGT
AAGCTGCTCGAACAAGAACACTTCGCGAAACCTCAAATCGAGTCCCGTATGGAAGAACTA
GGCGGCTTGTGGGAGAGACTTGTTCAGGCATCCGAGCTGAAGGGCAGCAAGCTGCAGGAG
GCGGCCGCTCAGCAACAGTTTAACCGAGCAGCCGAGGATATTGAACTGTGGCTGTCCGAG
GTCGAAGGACAGCTGCTTAGCGAGGATTACGGGAAGGATCTCACTAGTGTACAGAATCTG
CAAAAGAAACATGCGCTGCTTGAAGCTGACGTCAGCTCTCACGCTGAGCGGATTGAGGCG
CTGAGGGAACAGGCTGAGCAGTTCATTGAGAAGGGACACTTTGATGCTGACAACATCAAA
GCTAAACGGGACGCCCTTGTAGCTCGATACGCAGCCCTTGACAAACCGATGGCCGTTCGT
AAGCGGCGTCTTTTGGACTCTTTGCAAGCGCAGCAGCTCTTCAGAGATCTGGACGATGAA
GCCGCCTGGATCCGCGAGAAGGAACCTATCATCGCCTCCACCAACAGAGGTCGCGATCTG
ATCGGCGTTCAGAACCTGATGAAGAAACAGCAGGCGGTGATGGGGGAGATGGCGCAGCAC
GAGGCGCGAGTGGAAGCCGTGCGAGCCGCCGGCGCCGCGCTCAGGGACGCGGGACACTTC
GCCGCCGCGGACATCGCCGCGAGGCTGCACTCACTCACCGCCACTTGGACACAGCTGCAG
GAGAAGGCGCTGCAGCGCAAACAAGACCTGGAGGACTCTCTCCAAGCGCAGCAATACTTC
GCGGATGCCAACGAGGCGGAGTCCTGGATGCGAGAAAAGGAACCCGTGGCCAACACCCAG
GACTACGGCAAGGATGAAGACTCCTCCGAGGCACTGCTCAAGAAACACGAAGCGCTTCTG
TCCGATCTCGAAGCCTTCGGAAACACCATCAAAGCCCTCAGGGAACAGGCGAACTCCTGT
CGGCAACAGGAATCTCCCATAGTGGACGTGTCGGGCAAGGAGTGCGTCGTAGCTCTGTAC
GACTACGCCGAGAAGTCACCGCGCGAGGTGTCCATGAAGAGAGGCGACGTGCTGACGCTG
CTGAACTCCAACAATAAGGACTGGTGGAAGGTCGAAGTGAACGACCGCCAGGGCTTCGTG
CCAGCTGCTTATGTGAAGAAGATCGACGCCGGCCTGTCCTCCTCTCAACAGAATCTCGCC
GATTCCAACTCCATCGCGGCCAGACAGAACCAGATCGAAGGCCAATACGACAATCTGCTA
GCGCTAGCTCGCGAGCGTCAGAACAAACTCAACGAGACTGTGAAGGCTTACGTTCTCGTT
AGAGAGGCAGCGGAACTAGCCACATGGATCAAGGACAAGGAGATGCACGCGCAAGTACAA
GACGTCGGCGAGGACCTGGAGCAGGTGGAGGTGATGCAGAAGAAGTTCGACGACTTCCAG
AACGACCTTCGAGCCAACGAGGTCCGCCTGGCTGAGATGAACGAGATCGCCGTACAACTC
ATGACGGTCGGACAGACAGAGGCCGCCTTGAAGATCAAGACACAGATGCAGGAGCTCAAC
TCTAAGTGGACGTCGCTACAACAGCTGACCTCGGAGCGAGCGGCCCAGCTGGGGTCCGCT
CACGAGGTGCAGAGGTTCCATAGAGACGTGGACGAAACAAAGGACTGGATCGCCGAGAAG
GAGGCCGCGCTCTCCACCGACGACCTGGGACGAGACCTGCGCTCTGTACAGACCCTGCAG
CGCAAGCACGAGGGACTCGAGAGAGATCTGGCGGCCCTCGGAGACAAAATCCGCCAGCTG
GACGACACGGCCAACCGCCTCATGTCCACTCACGGAGACTCCGCCGACGCTACATACAGC
AAGCAGCGAGAGATCAACGAGGCCTGGCACCAGCTGCAGGCTCGCGCCAACGCCAGGAAG
GAGAAGCTACTCGACTCCTATGACCTGCAAAGATTCCTATCAGACTACCGTGACCTGATG
GCGTGGATCAACTCCATGATGGCGCTGGTCAGCTCAGAGGAACTCGCCAACGACGTGACC
GGCGCAGAAGCTCTGTTAGAGAGACATCAGGAACATCGCACGGAGATGGACGCCCGCGCC
GGCACCTTCCAGGCGCTGGAACTGTTCGGCCAGCAGCTGCTGCAGGGCGGGCACTACGCC
AGCGGAGACATCCAGGACAAACTGAACGCCATGGCCGATGCCCGGCAGGAGCTTGAGAAA
GCGTGGGTGGCTCGTCGTATGAAGCTGGACCAGAACCTCGAGCTGCAGCTGTTCTACCGC
GACTGTGAGCAGGCAGAGGCCTGGATGGGGGCCAGGGAGGCGTTCCTGGCGCCCGCAGAC
GTTCCCGACGGAGGAGATAATGTTGAACAACTCATTAAGAAACACGAGGACTTCGACAAG
GCCATCAATGCACATGAGGAGAAGATTGCTCAAGTTCAGACACTGGCGGATCAGCTGATC
GCGTCCGACCACTACGCCGCGGATCCCATTGACAAGAAACGAGCTCAGGTACTGGACAGG
TGGAGACACCTCAAGGAGGCGCTCATAGAGAAGCGGTCACGTTTGGGCGACGAACAGACC
CTGCAGCAGTTCTCACGTGATGCGGATGAGATGGAAAACTGGATCGCCGAGAAGTTACAA
CTCGCTACCGAAGAGAGCTACAAGGATCCGGCGAACATCCAGTCCAAGCACCAGAAGCAC
CAAGCGTTCGAGGCGGAGCTGGCGGCCAACGCGGAACGCATCCAATCTGTACTAGCTATG
GGAGGAAATCTCGTGCAGCGAGGACAGTGCAGCGGAAGCGAAGACGCCGTGCAGGCACGT
TTGGCGTCCATCGCGGACCAATGGGAGTTCCTTACTCAGAAGACGACAGAAAAGTCTCTC
AAGCTGAAGGAAGCCAACAAACAACGTACTTACATCGCCGCCGTCAAGGATCTTGACTTT
TGGCTCGGAGAGGTCGAGAGTCTGCTCACGTCTGAGGATTCAGGCAAGGACTTGGCATCG
GTGCAGAACCTCATGAAAAAACATCAACTGGTCGAAGCTGACATTCAAGCTCACGAGGAT
AGAATTAGTGATATGAACGCCCAGGCCGATGCCCTGGTGTCTTCAGGCCAGTTCGATAGC
GCTGGTATAGGAGCTAGACGGTCGGCTATTAACGAGCGCTTCGAGAAAGTTCGGGGGCTG
GCGGCTCATCGCCGGGCATTGCTCCATGAGGCCAACACGCTCCATCAGTTCTTCAGGGAC
ATCGCCGACGAGGAGTCGTGGATCAAAGAGAAAAAATTGCTGGTCGCGTCTGATGACTAC
GGGCGCGACCTGACGGGAGTGCAGAATCTGTTGAAAAAACACAAAAGATTGGAAGCGGAA
CTGGCGAGTCACGAACCAGCTGTACAAGCTGTGCAAAAGGCCGGCGAGAAGCTCAAGGAC
GTGAGCAATGTGGGAGTAGCGGAGATCGAACAACGGTTGAAGGCCTTGGAACAGGCCTGG
GATGCCCTTCAGGCTCTTGCGGCCGAGCGCGGGGTCAAGTTACAACAGTCACTTGCATAC
CAGCAGTTCCTGGCTAAACTTGACGAGGAGGAAGCCTGGATTAGTGAAAAGCAACAGCTC
GTTATGGCCAGCGAGTGCGGAGACAGTATGGCCGCAGTACAAGGACTGTTGAAGAAGCAC
GAGGCTCTGGAGGCCGAGCTGGCGGCGCGGGGAGTCCGCGTCCGAGACCTCACTACTGAG
GGCGAGGCACTACTGGCGGCTGGCAATCTACACGCAGACGCCCTGGCACATAGACTGCAT
GCATTGCAGGCCAAGTTGGAGAAGCTGACGAGTCTGGCGGCACGTCGCAAGGCAGCTCTC
GTTGACAACTCTGCCTACCTCCAGCTGTTGTGGAAGGCGGACGTGGTGGAGTCTTGGATC
GCGGACAAGGAGACGCACGTTCGTTCGGATGAATTCGGTCGCGACCTCTCCACTGTCCAG
ACGCTGCTAACCAAACAGGACACGTTCGATGCTGGACTCGCGGCCTTCGAACACGAGGGA
ATCCAGAACATTACGTCCCTGAAGGAACAGCTTGTGGCGGCCGGACACGAGCAGAGCGCC
GCCATCGTCAAGAGGCACGCGGACGTTATAGCGCGCTGGCAACGCCTGCTGGCCGCCGCA
GCCGCCCGGAAACAACGCCTGCTGCAACTACAGGATCAGTTCCGCCAGATTGAGGAACTG
TATCTGACATTCGCCAAGAAGGCTTCCGCATTCAATTCATGGTTCGAGAACGCCGAGGAA
GACCTCACTGATCCGGTTCGTTGCAACTCTATCGAAGAAATACGGGCGTTGCGTGATGCC
CACGCACAGTTTCAGGCGTCTCTTTCATCAGCTCAAAGCGATTTCGAGGCTCTAGCAGCT
CTGGACGCTCAAATCAAGTCGTTCAACGTCGGCGCCAACCCATACACCTGGTTCACTATG
GAGGCGCTCGAAGAGACCTGGCGCAATCTGCGCAAGATAATAGCGGAACGCGACGTAGAG
CTGACAAAGGAGGCTCAGCGTCAGGAAGAGAACGACAAACTCCGGAAGGAGTTCGCCAAA
CACGCGAACGCCTTCCATCAATGGCTGACGGAGACGCGTACATCCATGATGGAGGGAACC
GGTTCCCTGGAGGCGCAGCTGGCAGCGCTGCGGCAGCGAGCGGGTGAGGTGCGCGCGAGG
AGAGCCGACCTGCGACGACTGGAGGAACTGGGTGCCGCTTTGGAAGAACACCTGATCTTG
GACAACCGTTACACGGAACACAGCACGGTGGGCTTAGCCCAACAATGGGACCAGCTGGAC
CAGCTGTCCATGCGTATGCAGCATAACCTGGAACAGCAGATACAGGCCAGGAATCACTCC
GGAGTGAGCGAGGACGCCCTCAAGGAGTTCTCCATGATGTTCAAACACTTCGACAAGGAA
CGCTCCGGCCGCCTCAACCATCACGAATTCAAATCCTGTCTGCGGGCTCTCGGGTACGAC
CTGCCCATGGTGGAGGAGGGTCAGCCAGACCCGGAGTTCGAGGCTATCCTCAATGTGGTC
GATCCCAACCGCGATGGCCAAGTGTCGCTGCAGGAGTACATGGCCTTCATGATCAGCAAG
GAGACGGAGAACGTCCACTCTTCGGAGGAGATCGAGAACGCGTTCCGCGCCATCACCGCG
CATCAGGACCGCGCCTACGTCACCAAGGACGAACTCTATGCGAACCTCACAAAGGAGATG
GCGGACTACTGCGTGGCGCGCATGAAGCCGTTCGTGGATCCGAAGTCCGAGCGCCCCATA
CCGAACGCTCTCGACTACATCGACTTCACTCGCACGCTCTTCCAGAACTAA
Protein sequence:
MEQIPPPKEVKILETAEDIQERREQVLNRYEDFKQEARAKREKLEDSRRFQYFKRDADEL
ESWIQEKLQAASDESYKDPTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGSEMISAGHFA
SETIRKRLDELHRLWELLLSRLAEKGMKLQQALVLVQFLRHCDEVMFWIHDKETFVCADE
FGSDLEHVEVLQRKFDEFQKDMAAQEYRVTEVNQLAERLVLEGHPERETIVKRKDELNEA
WQRLRQMALMRQERLFGAHEIQRFNRDADETIAWISEKDVVLGSDDHGRDLATVQTLQRK
HEGVERDLAALEDKVTTLDGEAARLAAIHADHAPAIHGKRDEIANAWQRLVQKAQERRTE
LESSYALHRFLADYRDLISWMSDIRALIAADDLAKDVPGAEALLERHQEHKGEMDAREDV
MNACASSGEALVAAGHRGSAEVRTALEALQRDREALNALWEQRRVLYLQCMDLQLFYRDT
EQADTWMHKQEAFLANEDVGDSLDSVEALLKKHEDFEKSLAAQEEKIKALDEFATKLIEG
QHYAADDVAQRREMLLERRAALLEKSSQRRALLEDAYKYQQFERDCDETKGWINEKLKFA
TDDNYLDPTNLNGKVQKHQNFEQELLANKPRVDEINALGSKLLEQEHFAKPQIESRMEEL
GGLWERLVQASELKGSKLQEAAAQQQFNRAAEDIELWLSEVEGQLLSEDYGKDLTSVQNL
QKKHALLEADVSSHAERIEALREQAEQFIEKGHFDADNIKAKRDALVARYAALDKPMAVR
KRRLLDSLQAQQLFRDLDDEAAWIREKEPIIASTNRGRDLIGVQNLMKKQQAVMGEMAQH
EARVEAVRAAGAALRDAGHFAAADIAARLHSLTATWTQLQEKALQRKQDLEDSLQAQQYF
ADANEAESWMREKEPVANTQDYGKDEDSSEALLKKHEALLSDLEAFGNTIKALREQANSC
RQQESPIVDVSGKECVVALYDYAEKSPREVSMKRGDVLTLLNSNNKDWWKVEVNDRQGFV
PAAYVKKIDAGLSSSQQNLADSNSIAARQNQIEGQYDNLLALARERQNKLNETVKAYVLV
REAAELATWIKDKEMHAQVQDVGEDLEQVEVMQKKFDDFQNDLRANEVRLAEMNEIAVQL
MTVGQTEAALKIKTQMQELNSKWTSLQQLTSERAAQLGSAHEVQRFHRDVDETKDWIAEK
EAALSTDDLGRDLRSVQTLQRKHEGLERDLAALGDKIRQLDDTANRLMSTHGDSADATYS
KQREINEAWHQLQARANARKEKLLDSYDLQRFLSDYRDLMAWINSMMALVSSEELANDVT
GAEALLERHQEHRTEMDARAGTFQALELFGQQLLQGGHYASGDIQDKLNAMADARQELEK
AWVARRMKLDQNLELQLFYRDCEQAEAWMGAREAFLAPADVPDGGDNVEQLIKKHEDFDK
AINAHEEKIAQVQTLADQLIASDHYAADPIDKKRAQVLDRWRHLKEALIEKRSRLGDEQT
LQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANAERIQSVLAM
GGNLVQRGQCSGSEDAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDF
WLGEVESLLTSEDSGKDLASVQNLMKKHQLVEADIQAHEDRISDMNAQADALVSSGQFDS
AGIGARRSAINERFEKVRGLAAHRRALLHEANTLHQFFRDIADEESWIKEKKLLVASDDY
GRDLTGVQNLLKKHKRLEAELASHEPAVQAVQKAGEKLKDVSNVGVAEIEQRLKALEQAW
DALQALAAERGVKLQQSLAYQQFLAKLDEEEAWISEKQQLVMASECGDSMAAVQGLLKKH
EALEAELAARGVRVRDLTTEGEALLAAGNLHADALAHRLHALQAKLEKLTSLAARRKAAL
VDNSAYLQLLWKADVVESWIADKETHVRSDEFGRDLSTVQTLLTKQDTFDAGLAAFEHEG
IQNITSLKEQLVAAGHEQSAAIVKRHADVIARWQRLLAAAAARKQRLLQLQDQFRQIEEL
YLTFAKKASAFNSWFENAEEDLTDPVRCNSIEEIRALRDAHAQFQASLSSAQSDFEALAA
LDAQIKSFNVGANPYTWFTMEALEETWRNLRKIIAERDVELTKEAQRQEENDKLRKEFAK
HANAFHQWLTETRTSMMEGTGSLEAQLAALRQRAGEVRARRADLRRLEELGAALEEHLIL
DNRYTEHSTVGLAQQWDQLDQLSMRMQHNLEQQIQARNHSGVSEDALKEFSMMFKHFDKE
RSGRLNHHEFKSCLRALGYDLPMVEEGQPDPEFEAILNVVDPNRDGQVSLQEYMAFMISK
ETENVHSSEEIENAFRAITAHQDRAYVTKDELYANLTKEMADYCVARMKPFVDPKSERPI
PNALDYIDFTRTLFQN