| New model in OGS2.0 | DPOGS216173 |
|---|---|
| Genomic Position | scaffold1533:+ 9708-20834 |
| See gene structure | |
| CDS Length | 3522 |
| Paired RNAseq reads | 2714 |
| Single RNAseq reads | 8787 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014159 (3e-122) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC007283 [Tribolium castaneum] (8e-104) |
| Best NR hit (blastx) | PREDICTED: similar to CG2247-PA [Apis mellifera] (3e-76) |
| GeneOntology terms | ND |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR022364 F-box domain, Skp2-like IPR011011 Zinc finger, FYVE/PHD-type |
| Orthology group | MCL17974 |
Nucleotide sequence:
ATGTCGGAAGAAATGGCGGTGGGTGATAACGCATCAAATGAGGAGCATAAAGTCGCCAGC
GAAGATGTGGGCTCGGAGGGAATGGATTCTGCTGACGCTACAGAAGTTCCAGCTGTATTA
AAAACTGCTGAGACAGAAATTAAACCAGAAATAAATGAAAATGCCGAAGACTCGGAATTG
CAAGCAGAAATGGAGAGTGAAGAAAATGAAATTGAGGAATATAAAGAAATTGAAGAAAAA
ATGCAAGAAATAAACCAAGAAACTCAAGACGCAAGTGATGAAGCTGCTAGAGGTGTGAAG
CGTAGACTGTCGACAGCATTCAGCGACGATGGAGAGGAGTTTAAAGGCTTTGATCAGTGT
GAACCGAGCAGCCTGGACGACTACAGCAAAACTGTTGAGGATGGGAGACGAGTTAAACCG
AGAACCTCAAGTGATAGCGATGGTTTCAAAGGTTTTGACCTTATAGAGCATAACAATCTG
ACAGGCTACTGTCAGGTTTTAGAACGGCTGGAAGCTGAAGTGCTAGCAGCTGCAAAGACA
TATACTCCTGTTCGACGTGTGATGGCATCACTTCAAAGAAGGATCGATGCAAGCGGGTGT
ACCAAGTGGTCAGAACATCTTGAGGCTGAGGTTTCTGAAGTTGTGAGGAGCTTCTCCACC
GACGATGACTCCAAGCTGAGAAAGCGGACCGAAGGATCGAGACCCTCGTCGGCTTTGTCA
TCAAGATCTGACGGTGATGGCGGTGTGTCAACTGATTTGACACACCGCCATCACCGTCAG
ATCTTGATGACAAAGCCGACGAGGGTCTCGATCCTTCTTTTATTCGGCAATCAATATTGT
TATGTTCTTGACATCCGCACTCACCGGTCCGCTTTCTCAGCTTGGAGTCATCGTCGGTGG
AGAAGCTCCTCACAACTTCAGAAACCTCAGCCTCAAGATGTTCTGACCACTTGGTACACC
CGCTTGCATCGATCCTTCTTTGAAGTGATGCCATCACACGTCGGACAGGAGGATGCGAAA
GTCCAGCGTCGTGTTGAGTCTCCAGTGCCAGCAGTCACACCGACCTTAGAGTCCAAGAGA
ACTCCAAAGCCCAAACCTCCGAAGGGAGCCAGCCCCGAGCCTGGGATGAAGTCACCCCCT
GGGAAGTTAAAGGTGTCGCAGGTGAAGTCAATGGGCTCCAGGTTGAGTAGCAACGGTGCA
CCAGCTGCGAAACAGGTGAAGAAGACCCCACAACAAGCGGTCACACATGACAACAACAAC
ATGGCCGCCTGGAAGAAACCTAGGGGCCCGCCGACGGTGCAGCCGCGGCCGGTGGCAGGG
CAGCCGGGGACGACGACACCGCCGGCGCAGCTCGCACAGCACACACAGCCCGCGAGCCTC
GCACAAGCCGCTCATCACGTGCAGCCTGTGCAACCAGCCCAGCACATACAGCCTATCCAC
CCCGCCCCCGCACCCGCCCACGCCCCGCATCAGATATCCGTTCCCCGGCCGCAGCTCACA
CCGGACAGAGATGTACCGCCTCCCTTACACCATCAGAACCGTCAGATCCAACAGCCGTGT
TCCATGACGTGCGGGACGGGTGTGCCGTCGTTGGCCTGCGAGGCCTGCCTCTGTTTGTAC
CACCCGGCCTGTGTGGGGCTCCGTCTGCCGCAGGACACGTTCCTGTGTAAGAACTGTCGT
AAGACTTCATCTCCGCCGGTGGAGCCCCCGCCCCTCACCCACAAGTCGGGCGTGACGTCA
CTACCGGCCGGAGCTGGCCCCGGGGCTCCGTGCTCGTCCAGCGCCAGGCGCCTTCCGGTC
CCAGTCCCAGTACCAGTACCGAAATCGAGAAATGACAAGCGAGTGCTCTTGAGAATGAAG
GTTGCGGGCGGCGGTCCTGATGGCGAGCGTGTGTGGTCCGTGGCCAAGCCGGGCGCTCCG
GCCCCGGCTCCGCCCCCCGCTCCGCCCCACTCCGCGCCCACACCCCCTCCGTCCAATCCC
CCCACCACCACCTGCCGGCCTTCATTACCACAGTCGCTGGTGGTGCTAAACGGCAGACGG
TTCATAGTAGTAGCTAGAGCTGTGCATCATGATATTAAAGTACGCCGCGGAGTGTCCAAC
GGCGCTTCGCCCCCGCCGGCTGCGCCCTCGCCCGCTCTGAGACGAAGAGTCAAAAAAGAC
GACACCGATTACTTCACACCCTTCATAGAAAAGGCTAAGGCGAACAACTATAATGTAGCT
GTACAGATCTTCCAGTACTTAGGCATGCGTGATGTAGCGCGCGCCGCCCGCACGTGCTCG
CTGTGGGCGGAACTAGCCGCTACACCCGCACTATGGAGGCACGTACGGATGAAGAATTCG
CACATCTTCCAGTACTTAGGCATGCGTGATGTGGCGCGCGCCGCCCGCACGTGCTCGCTG
TGGGCGGAACTAGCCGCTACACCCGCACTATGGAGGCACGTACGGATGAAGAACTCGCAC
GTGAGTGACTGGGCGGGCCTGTGCGCCGCTCTCCGCCGCCACGGGACCCGCTGGCTCGAC
CTCCGCAAGATGTTGCTGCCACCAAATGACACGTTATTCTGGGATCAGTTCGCGGAACAC
ATCGGCACCGTCGACACGCTCGAGAGACTAGAGCTATGTCGCTGTCCCGCCCGCGCGGTG
GAGGCGTCCTGTGAGCGTGTCCCGGGTCTGCGCGCGTTGTCCGCGCCCGCCATACGGGAC
GCCAGACTCGACCCCGCGCCACTCGCCAGACTCACTAGACTGGAGCTGCTCAGACTCAAG
AGCCTCACAGGTCTATCGTTGACGCGAGACCTCCGCCCCCTGGCCGGCCTCTCTAGACTC
CAACACCTGTCGCTGACGTCCATCAAGGAGCTGGGCTGGTGCGCCTGTGAGGTGGTCGGA
CAGTTGGAACAGCTGGAGTCGCTGGAGCTGGGAGAGTGCTCCTTCGGCGGTTCCTTCGCC
ACGGCTCTCGGAAAACTGGTCAAGTTGCGGAAGTTAAGGCTGGAGCGAGGGGTGGCACAT
TGCGCCGCGCCGGCATTGCTAAGAGCACTGGCAGCCCTGCCCAAACTGACACGGCTGGAG
TTAGTTAATTTCGATGTTAAGGTCGGCTTCGACGATGCTCTGGCGGAGTGTAAAAACATA
CAGAGACTGCTCATCATACCGACGTACGTGTCGCAGTCGGCCACCACCAACAAACAGGTT
CTGAGCGGTGTGCTGCGATTGAAAGAGACCCTGACGCATCTCATGTGGGGTGTGACCATC
GAGCTGCTGAGGGTCACGGAGCTGTTCATAGACCAGTGTGAGGCGGGCGACGGAGACACC
AAGCGGCGGGACGTAGGGGAGTGCATACCCGTCCTCAAGCCGGTCCCCGGGTGTCGTCTG
CCCGACGACCACCGCACCGTGGCCGGACCTCCGCAGGTTGAAATTCTACCCATCCCGACC
CTCCAGCGGTTGCTGGCGGCTCAGCTGCCGCGGACCAAGCTCAAGCTGCTCCGGATCCCC
TTCCACGCCACCTGGAGACAGTCGCTGGCTGATTTCCAATAG
Protein sequence:
MSEEMAVGDNASNEEHKVASEDVGSEGMDSADATEVPAVLKTAETEIKPEINENAEDSEL
QAEMESEENEIEEYKEIEEKMQEINQETQDASDEAARGVKRRLSTAFSDDGEEFKGFDQC
EPSSLDDYSKTVEDGRRVKPRTSSDSDGFKGFDLIEHNNLTGYCQVLERLEAEVLAAAKT
YTPVRRVMASLQRRIDASGCTKWSEHLEAEVSEVVRSFSTDDDSKLRKRTEGSRPSSALS
SRSDGDGGVSTDLTHRHHRQILMTKPTRVSILLLFGNQYCYVLDIRTHRSAFSAWSHRRW
RSSSQLQKPQPQDVLTTWYTRLHRSFFEVMPSHVGQEDAKVQRRVESPVPAVTPTLESKR
TPKPKPPKGASPEPGMKSPPGKLKVSQVKSMGSRLSSNGAPAAKQVKKTPQQAVTHDNNN
MAAWKKPRGPPTVQPRPVAGQPGTTTPPAQLAQHTQPASLAQAAHHVQPVQPAQHIQPIH
PAPAPAHAPHQISVPRPQLTPDRDVPPPLHHQNRQIQQPCSMTCGTGVPSLACEACLCLY
HPACVGLRLPQDTFLCKNCRKTSSPPVEPPPLTHKSGVTSLPAGAGPGAPCSSSARRLPV
PVPVPVPKSRNDKRVLLRMKVAGGGPDGERVWSVAKPGAPAPAPPPAPPHSAPTPPPSNP
PTTTCRPSLPQSLVVLNGRRFIVVARAVHHDIKVRRGVSNGASPPPAAPSPALRRRVKKD
DTDYFTPFIEKAKANNYNVAVQIFQYLGMRDVARAARTCSLWAELAATPALWRHVRMKNS
HIFQYLGMRDVARAARTCSLWAELAATPALWRHVRMKNSHVSDWAGLCAALRRHGTRWLD
LRKMLLPPNDTLFWDQFAEHIGTVDTLERLELCRCPARAVEASCERVPGLRALSAPAIRD
ARLDPAPLARLTRLELLRLKSLTGLSLTRDLRPLAGLSRLQHLSLTSIKELGWCACEVVG
QLEQLESLELGECSFGGSFATALGKLVKLRKLRLERGVAHCAAPALLRALAALPKLTRLE
LVNFDVKVGFDDALAECKNIQRLLIIPTYVSQSATTNKQVLSGVLRLKETLTHLMWGVTI
ELLRVTELFIDQCEAGDGDTKRRDVGECIPVLKPVPGCRLPDDHRTVAGPPQVEILPIPT
LQRLLAAQLPRTKLKLLRIPFHATWRQSLADFQ