New model in OGS2.0 | DPOGS216174  |
---|---|
Genomic Position | scaffold1533:+ 28723-46298 |
See gene structure | |
CDS Length | 5364 |
Paired RNAseq reads   | 13435 |
Single RNAseq reads   | 31788 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014161 (6e-143) |
Best Drosophila hit   | yolkless, isoform A (1e-139) |
Best Human hit | low-density lipoprotein receptor-related protein 2 precursor (3e-70) |
Best NR hit (blastp)   | vitellogenin receptor [Spodoptera litura] (0.0) |
Best NR hit (blastx)   | vitellogenin receptor [Spodoptera litura] (0.0) |
GeneOntology terms    | GO:0004872 receptor activity GO:0005575 cellular_component GO:0006898 receptor-mediated endocytosis |
InterPro families    | IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR006210 Epidermal growth factor-like IPR000033 LDLR class B repeat IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site IPR011042 Six-bladed beta-propeller, TolB-like IPR009030 Growth factor, receptor |
Orthology group | MCL10054 |
Nucleotide sequence:
ATGGCAGTTCTCCTGTTATTATTTTCGTTGCTGGCAGTCTGTTCCGCGCAGTTTAAGGAT
GACTTGCAGACTTATGAGACGGAGTGTCTCATGGAAGGTTCATTTTCTTGTACATCAGGA
GCGTGTATACCGTCGGAGAAGTATTGCGATGGGTATAACGACTGTGAGGATGGAGGCGAT
GAGAACTTTTGTGCCAATCACCGTCCAGATGCTCACTTGTGTAACGAGACTCACCAGTTT
CTATGTACGGACGGGTTGATGTGTCTACCGAGCTCTTGGGTGTGCAACTATGAGAACGAC
TGCAAAGATGGTTCCGATGAAATGGGCTGTGAAAAGATAATCCAACATGATAATTCATCA
TGCAAAGGTTTCCAATGCGACGGCGGGAAGCTGTGCATATCAGATCTTTGGATGTGTGAC
GGTTATTACGACTGTGCTGATAAAACAGATGAAGACGTCGTGGACACTTGTCATCATGCA
CCTCGTCCGAAGCATCTTCATGATACACTGAACTGCGAGGTCAGATCTATGAACTACACG
TGCTTGGATAAATCGTACTGCATACCGTACAATAACATGTGTGACGGTCTGAAGGATTGT
AGAGACGGTAGTGATGAAGGGGCATTTTGTGCCGAATGGTCCAAGATGTGTGCAAACAGA
ACCTGTCCCAGGGAGTCGTTCTGCAAGCCCACTCGTAATGGTGGTACTTGCGTGTGTAAC
TCCTACAAGGAGTACAATCCCAGCAGTGGGGAGTGCGAGCGTTCCCGACAGTGTCTCCAG
GAAGTGCCCGTCTGTTCCCACATGTGTGAGGATATGGGGGACTACTTCAAATGCACTTGT
GAAGATGGATACAGATCTGATCATGCTCAGTATCTGTGCTTTGCTCCTGGTCCCGAAGCG
ATGTTGTTCTTCAGTACCCAAAACTCTATACAGTATGTGACAGTCAAATCGAATCATAGC
GTCACCGTGTTGACTGGAATCAAAAAGGCCCACGGTGTTGCATACGATGGCAAATATTTA
TACTGGGTCGAAACAGAAAAAGGACATCAGGCCATCATGAAGGCACAGCTAGAAGACGTC
GCTGGAACCAAACAGGTGCTGGCTGCCCTGGGTCTTGAGGATCCGGGAGATATAGCCGTG
GACTATCTCGGTGATAACATCTACTTCAGTGACACAGCACGCGGCTGTATCACTGTGTGT
CGGACTGATGGCGCTCTGTGCGTCACGCTCGCCGCACACACGAGGAGACCAAAGTTTGTT
ACACTGGATCCAAGGAAGGGCGTCATGTATTGGGCTGATAAGCATGACAAGCCGGTTATA
ATGAAAGCTAAGATGGATGGCTCGGAGTCGGAAAACCTTGTGCACGAGCTGAGTACTTTT
GCGAAAGGCCTTGCTTTGGACGCACCGAACGGAAGGTTGTACTTCGTTGATGGAACTATT
AAAGTTGTTATACTGAATGATAAGAGAGTTTATTCCTTTTTCGAAGAGCAATTCCACCAT
CCGTACTCGCTGTCAGTGTTTGAAAACACAATATTCTGGAGTGATTGGACTTCCAGGACG
ATACAGACAGCAGATAAAATACACGGCACTAGCATCAACAGGAACATTTTGCTGACCCTG
GATACGCCGGTGTTTGACATGCACCTCTACCATCCGATCCTCACGAACGCAACCCACAAC
CCGTGTTCGTCTCGCTCGTGTCCACTCTGCCTTATAACATCCAACACGAGCTCTGTGTGC
GCCTGTCCAGATTCTATGCGAAATGTTAAAGGGCATTGCGAATGGATACCCGGCTATCGT
CCTGATTACTTGTTGGTAGCATCAGGGTCAGCTTTCATCAGAATATATTATGATACTGTC
GGAAATCCCGAGACCCACTCGACTGTCCTCGATATAGGAAGGGTCCAAGCCATGGCCTAT
GACAATTTTAGAGATACTCTTTATATATACGATGGTCAACATAAGTCTATCAACTCTATC
CTTATGAGCGACTTTTCCCTCGGCGTTACTCACCTTTTTATGTACAAAGGTCTTGAAAAT
GTTGTTGATATGGATTATGATTACGTATCCGATTCTTTATATATCTTGGACGCTGGTCGT
CGCGTTATAGAAGTGACTTCACTGAAAAACAAACACACAGCATTACTATATCGATTTAGG
GAAGAGGAAATACCCATAAGTTTTTGCGTTTTGTCAGCGTACGGACGTATGTTAGTTGCT
GTCTTGGATACCGATAACGATATCATCTACATAGATTCATTCGGACTCGATGGTGACGAT
CGTAAACACATAGTTACAAATAATACACGTGGTCCAAATATCCGGATGAGGTACTCAACC
GATCTGGATGTAGTATTTTTATCTGATGATCAAAACGGAGTAATTGACTTTCTACATCCA
CAAGGTACTGGTAGAGAGAATTTCCGTGAAGTTGTAACAAATATCGCTAGTCTCGCTGTG
ACCGACAATCAAGTGTTCTGGACGGACAAACGGTCGACCAAATTGTATTGGGCGGATATG
CATGATGCGACGAGGAAGATACGCAGAATAGAATTATCAATATTTCCAAACACCACACAT
CTGGTTATTCTCGCTACTTCACCCCTTCCTAAATCACATGGTCACACATGCTCCAACTCG
AACCCCCCTTGCTCCCATATTTGTGTGCAAAAATCGCACGAATACGTAAAACCGGGATCG
ATTGATTCAGCGCCTTTGCAGTACACTTGCTTGTGTCCCGTCGGCTTCATAAATAATAAT
GGGATTTGTTACGAAGTCACAAAGTGTAAAGAGCACGAGTTTTATTGTCATAAAAGTAAT
CAATGCTTTGACGGTAGCAAGAAATGCGATGGTACTGAAGATTGCAAATTTGGTGAAGAC
GAAGAAGGGTGCTTGATTAAAGGAACATATTATTTGAAAATATGTGAAGATGACGAAATC
GATTGTCATGGCATTTGTATTCAGAGAACTGAAATCTGTCGGAACAATACCACAAAACAG
TTGTTAACGTGCGGTTCCTCTGAATTCCGTTGCTCGGACAACTCTATATGTATAGAGCGT
GCGCTCGCGTGTGACGGCCACGCGGACTGTAGAGACGCTTCTGATGAACACCCAGACGCC
TGCGATACCAGAGACTGTGGCGAATTTGAATACATGTGTGCTTCAGGATCATGTATACCA
CTCACGTGGAAATGTGACAAACACGAAGATTGCTTGGACGGCTCCGATGAGATCAGCTGT
GAGAGCAGAAGCTGTCCGTCCGGTACCTTTGAATGTGATACTGGATGTGTCGAGGTTTAC
AAGAGATGTGACGGAAAATACGACTGCGAAGATCACGAGGACGAAAGGGACTGTGATGAA
CCGGAGTTTGCTGGAGTTATTGACTTCTCGTCGTGCGCTCCGTGGGAGTACAGATGTGAG
CACAACAAGTCAATTTGCTTGCCTCAAACAGCACGAGAGAGGAGCTTTTCAGTGGAAATG
AGCGTTTTACGCGCGTTAGATAGGGGCCCCTTTTACCTACACTTGGGTAACAAGTCCCAG
CCGCTGTTAAAGCTCCTCTCCCTGCAACGCGATGGACCCGGCGCACGTTGCAATGGCCGC
ACAGACTGCCCGGGTGGTTCGGACGAGGCGGGATGTAACTTCCAGTGCGGGGAACTGTTC
CCGTGCACTCAGGAACATTGGTGCGTGTACCGAGACCAGCTCTGTGATGGCAGGCAGGAC
TGCGCTGACGGATCCGACGAGACCTTCGACGTTTGTGCCAGAGCCAATAAAACAAGACCT
CTGACACAAACGCCGCCAACACCTTGCGAGGACTACCGCTGTGATGATGGCCAGTGCCTG
CCGTGGGAACACGTGTGTGACGACAAGACTCACTGCCGGGACGGCTCCGACGAGAACGGG
CTCTGTAACAGTACTTGCGCTGCTGGGTGTATATCTCGGCGTACTCCCCGCGGCCCGCGG
TGCTCATGCAAGAGTGTCTGTGAGGAGTGCTCGCACACGTGCCACACTGACGGGGAGACG
TCCGTGTGCGCCTGCTATAAGGGATACGGACTTAGATTGGACCGTCGCTCGTGTAAGGCG
CTGTATGGGGCTCCGGCCACCTTATACTCCCGGGGGGGTGCAGCGTGGTCATTGACCTCT
CACGTTCATACAATGCTATATCACGAGGGGGAGGAACTCAGCGACTTGGATTGCGATGTC
AGGCGAGGCAAGTTATATTTTACTTCGAGTGAGGTCGGTAAGCTGATTGAAGTGGACAAC
AAAAGACAGCCGCCAGTAAAAAGCATAACCAACATAGGGAGACCTGGCAAGTTGTCAGCG
GACTGGATAACCGGTAACGTGTACTTCGCGGACAGCACTCCGTCCCAAGGCTCCATACGA
GTTTGTAATTTCAAAAAGCAGAAGTGCGCCAAATTACAGAAGATACCCACTGATGTGCAG
GTGACAGCCCTAGTTACAGACCCCGCTAATCACCTGTTATTCTACTGTCTATCTGACTCT
TCTGAATCTCACATACGCTCGTCCTCGATGTCTGGTCGCTCTCCGTCCGACGTGGCCACG
GTTCCAGCTTGTCTGGGCCTCGCTGTGAACTCCTTCAGCAAACTCCTGTATATCAGCACG
CCATCTTCTATCATGAAGGTCGGCTATGATGGAAGCAATCTCATAACTCTCATAGACCAC
CCTATAAGCACACCTCACCTCGCATTCTTCGAGGACTACATATACTTCATACACAATTCC
CACGTAACCCGCTGCCTGCACTTCGGCCCCAAAACCTGCGAGACCCTCAGCCACGTGTAC
AACGCCTCAAACTTCGTCCTAAGTCACGAGAGCATACAAAGAGATGACGTCATCAACTCG
TGTGACGTCACGGAGTGCGGACACGTGTGCGTGTTGGATCGTGTAGCTGTGTGCGTGTGT
CATGATGGCAGTATAGTTAGAGATGGAGTGTGTCCTGGGGACAGGGCGGAGGAGCAGGCC
GTGTTCAGTGACGGCTCCCATTCCCACGTTTGGTCCTTAACATTTCTGTGGGTGCTGTTG
CTGATGCTCGCGGTGTACGCGGCCGCGTTTGTCCACTACCGCCTCTACAGGAAAAACAAG
ACGCCAGCCGAATATATACAAGTCAGATATCACAACACCTCAGAAGGCCTGACTCATCTT
TCGCACCCAATCATCGACGTCCCTGAAGCCGGAGCAATGAGCCACGAGTTTGTGAACCCA
CTGCAATTCGTAAGAAATTTTTGGCGGGAATCCTTCGAAAGACAGAAGCCGATCGGTTCA
AATGTCATGTACGAAGAACAGCAGGATCCATCGGACACGGAGTCCGATCTCGATGTGAGA
GAAACAAGGAGAATGATCAAATGA
Protein sequence:
MAVLLLLFSLLAVCSAQFKDDLQTYETECLMEGSFSCTSGACIPSEKYCDGYNDCEDGGD
ENFCANHRPDAHLCNETHQFLCTDGLMCLPSSWVCNYENDCKDGSDEMGCEKIIQHDNSS
CKGFQCDGGKLCISDLWMCDGYYDCADKTDEDVVDTCHHAPRPKHLHDTLNCEVRSMNYT
CLDKSYCIPYNNMCDGLKDCRDGSDEGAFCAEWSKMCANRTCPRESFCKPTRNGGTCVCN
SYKEYNPSSGECERSRQCLQEVPVCSHMCEDMGDYFKCTCEDGYRSDHAQYLCFAPGPEA
MLFFSTQNSIQYVTVKSNHSVTVLTGIKKAHGVAYDGKYLYWVETEKGHQAIMKAQLEDV
AGTKQVLAALGLEDPGDIAVDYLGDNIYFSDTARGCITVCRTDGALCVTLAAHTRRPKFV
TLDPRKGVMYWADKHDKPVIMKAKMDGSESENLVHELSTFAKGLALDAPNGRLYFVDGTI
KVVILNDKRVYSFFEEQFHHPYSLSVFENTIFWSDWTSRTIQTADKIHGTSINRNILLTL
DTPVFDMHLYHPILTNATHNPCSSRSCPLCLITSNTSSVCACPDSMRNVKGHCEWIPGYR
PDYLLVASGSAFIRIYYDTVGNPETHSTVLDIGRVQAMAYDNFRDTLYIYDGQHKSINSI
LMSDFSLGVTHLFMYKGLENVVDMDYDYVSDSLYILDAGRRVIEVTSLKNKHTALLYRFR
EEEIPISFCVLSAYGRMLVAVLDTDNDIIYIDSFGLDGDDRKHIVTNNTRGPNIRMRYST
DLDVVFLSDDQNGVIDFLHPQGTGRENFREVVTNIASLAVTDNQVFWTDKRSTKLYWADM
HDATRKIRRIELSIFPNTTHLVILATSPLPKSHGHTCSNSNPPCSHICVQKSHEYVKPGS
IDSAPLQYTCLCPVGFINNNGICYEVTKCKEHEFYCHKSNQCFDGSKKCDGTEDCKFGED
EEGCLIKGTYYLKICEDDEIDCHGICIQRTEICRNNTTKQLLTCGSSEFRCSDNSICIER
ALACDGHADCRDASDEHPDACDTRDCGEFEYMCASGSCIPLTWKCDKHEDCLDGSDEISC
ESRSCPSGTFECDTGCVEVYKRCDGKYDCEDHEDERDCDEPEFAGVIDFSSCAPWEYRCE
HNKSICLPQTARERSFSVEMSVLRALDRGPFYLHLGNKSQPLLKLLSLQRDGPGARCNGR
TDCPGGSDEAGCNFQCGELFPCTQEHWCVYRDQLCDGRQDCADGSDETFDVCARANKTRP
LTQTPPTPCEDYRCDDGQCLPWEHVCDDKTHCRDGSDENGLCNSTCAAGCISRRTPRGPR
CSCKSVCEECSHTCHTDGETSVCACYKGYGLRLDRRSCKALYGAPATLYSRGGAAWSLTS
HVHTMLYHEGEELSDLDCDVRRGKLYFTSSEVGKLIEVDNKRQPPVKSITNIGRPGKLSA
DWITGNVYFADSTPSQGSIRVCNFKKQKCAKLQKIPTDVQVTALVTDPANHLLFYCLSDS
SESHIRSSSMSGRSPSDVATVPACLGLAVNSFSKLLYISTPSSIMKVGYDGSNLITLIDH
PISTPHLAFFEDYIYFIHNSHVTRCLHFGPKTCETLSHVYNASNFVLSHESIQRDDVINS
CDVTECGHVCVLDRVAVCVCHDGSIVRDGVCPGDRAEEQAVFSDGSHSHVWSLTFLWVLL
LMLAVYAAAFVHYRLYRKNKTPAEYIQVRYHNTSEGLTHLSHPIIDVPEAGAMSHEFVNP
LQFVRNFWRESFERQKPIGSNVMYEEQQDPSDTESDLDVRETRRMIK