New model in OGS2.0 | DPOGS204065  |
---|---|
Genomic Position | scaffold9374:+ 2854-4076 |
See gene structure | |
CDS Length | 1020 |
Paired RNAseq reads   | 590 |
Single RNAseq reads   | 1801 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010738 (2e-130) |
Best Drosophila hit   | CG7675, isoform B (9e-95) |
Best Human hit | retinol dehydrogenase 14 (9e-54) |
Best NR hit (blastp)   | GJ10835 [Drosophila virilis] (2e-112) |
Best NR hit (blastx)   | PREDICTED: similar to short-chain dehydrogenase [Nasonia vitripennis] (1e-101) |
GeneOntology terms    | GO:0016614 oxidoreductase activity, acting on CH-OH group of donors GO:0005488 binding GO:0055114 oxidation reduction |
InterPro families    | IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase |
Orthology group | MCL15330 |
Nucleotide sequence:
ATGATTGTGGCAGAAGCTTGGAAAGCGAACTACCTGTACTGGTTACTACCAGCAATACTT
TTACTTGGTCTTCTTGCGTTCTTCGGTCTGATCGCGGTATTTTTCGCTATTCGTTTTTAC
GCTAAGTTCACTTGCGGAAGATATCGCGAGAGCACCAGAATGGATGGAAAGACGGTTATA
GTGAGTGGATGTACCAGCGGAATAGGAAGAGAAACTGCTAAAGATTTGGCGAAAAGGGGC
GCAAAAGTTATTATGGCCTGTCGCAATTTAGATAAGGCTGAGCAAGTCAAAGATGAAATA
TTACAGACGACGAAAGACGCGACCGTTTTAGTTAAGAAACTGGATCTCAGCTCGTTTGCG
TCAATACGATCCTTCGCTGAAGACATAAACAAGAACGAGAAACATTTGGACGTCTTAATC
CACAACGCGGGATACGCCGAGACGTTCAAGAAGAACAAATCCGAAGACGGCATAGAACTT
ACGATGGCCACTAATCATTATGGACCATTCCTATTGACCCATCTTCTGGTAGATTTACTG
AAAAAGAGCGCTCCGTCAAGAGTGGTCGTCGTGGCGTCCTCATTATACAGACTCGCATCC
GTCAATTTGGACAACCCTAATCCCTTGACGACTATGCCGGGATATCTCTATTATGTGTCT
AAGGAAGCAAATATTCTCTTCACCAGGGAATTGGCCAGGAGATTAGAAGGTACTGGCGTC
ACGGTCAACTGTTTACACCCCGGCTTAATCGATAGTGGTATTTGGAGGAACGTACCGGCG
CCATTAAGCTGGGGTCTGTGGTTGATCAACAAATCGTTCTTCAAAACACCAGCACAGGGC
TGTCAGACGTCCGTAATGCTAGCTGTCGACGAGAACCTGTCCAAGGTCACCGGCAAATAC
TTCTCAGACTGCCAGGAGAGTTCGCTATCAACATCCGCAAGCGACATGGGTAAAGCCAGA
AAATTGTGGGAGATATCCGAAAAACTGGTCAAACTAGAGGAAAACGATCCCAGGATCTAG
Protein sequence:
MIVAEAWKANYLYWLLPAILLLGLLAFFGLIAVFFAIRFYAKFTCGRYRESTRMDGKTVI
VSGCTSGIGRETAKDLAKRGAKVIMACRNLDKAEQVKDEILQTTKDATVLVKKLDLSSFA
SIRSFAEDINKNEKHLDVLIHNAGYAETFKKNKSEDGIELTMATNHYGPFLLTHLLVDLL
KKSAPSRVVVVASSLYRLASVNLDNPNPLTTMPGYLYYVSKEANILFTRELARRLEGTGV
TVNCLHPGLIDSGIWRNVPAPLSWGLWLINKSFFKTPAQGCQTSVMLAVDENLSKVTGKY
FSDCQESSLSTSASDMGKARKLWEISEKLVKLEENDPRI