New model in OGS2.0 | DPOGS212512  |
---|---|
Genomic Position | scaffold1116:- 17-19611 |
See gene structure | |
CDS Length | 3747 |
Paired RNAseq reads   | 2353 |
Single RNAseq reads   | 5379 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009779 (0.0) |
Best Drosophila hit   | dilute class unconventional myosin, isoform C (0.0) |
Best Human hit | myosin-Vb (0.0) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC009935 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC009935 [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0005524 ATP binding GO:0017137 Rab GTPase binding GO:0003774 motor activity GO:0005516 calmodulin binding GO:0043197 dendritic spine GO:0000166 nucleotide binding GO:0032880 regulation of protein localization GO:0003779 actin binding GO:0016459 myosin complex GO:0015031 protein transport GO:0019717 synaptosome GO:0035255 ionotropic glutamate receptor binding GO:0043025 neuronal cell body GO:0048471 perinuclear region of cytoplasm |
InterPro families    | IPR001609 Myosin head, motor domain IPR000048 IQ motif, EF-hand binding site |
Orthology group | MCL10911 |
Nucleotide sequence:
ATGACTACAAAGGAACTATATACGAAGGTCCCCCGGCGGATATGGGTGGAGCACCCGGAA
CTTGTGTGGGAGTGTGCCACCGTGACCAGCGACTATCGTTCAGGAGTCCTGATCGTTCAA
ACAGACCAGACTGGCGAGCTGCGTCAGATTAAGATCACAGATGAGAGCAAGATGCCCCCC
CTAAGGAATCCCTCGCTCCTGATTGGTCAGAATGATCTGACGTCATTGTCCTACCTACAC
GAACCCGCAGTACTGCATAATTTGAAAGTCAGATTCTGTGACCGGAACGCAATCTACACA
TACTGCGGGATCGTACTCGTCGCTATAAACCCGTATTACGATTTGCCTATTTATGGTGAT
GAAACAATCATGGCATACCGCGGCCAGTCCATGGGTGACCTTGACCCCCACATCTTCGCC
GTGTCCGAGGAAGCCTACACCAAGTTGGAGAGAGAGAGGAGAGATCAGAGTATAATTGTG
AGCGGTGAATCAGGCGCCGGGAAGACTGTGTCGGCTAAGTATGCCATGAGATATTTTGCA
GCCGTCGGAGGAAATACTAGTGAGACGCATGTAGAAAGAAAAGTATTAGCCTCCAGCCCT
ATTATGGAGGCTATAGGTAACGCGAAAACAACACGCAATGACAATTCGTCGCGTTTCGGT
AAGTTCATAGAGATCCACTTTGACGAGATGTACCGGATATCCGGCGCCAGCATGAGGACC
TACCTCCTGGAGAAGTCGAGGGTTGTCTATCAGAGTTCCGGTGAGAGGAACTACCACATC
TTCTACCAGCTATGCGCTGCTAAACATTTGCTGCCAGAATTGAAATTGGACCACCAAGAC
ACCTTCCACTACCTGAACCAGGGCGGAAGTCCAGAAATAGACGGGGTCAACGACCTTAAA
GCCTTCCACGAAACAAGAAACGCTCTAACTACTTTGGGCGTTACTGAGTCGGAGCAACAG
AACATGTTCACAGTACTGGCGGCCATCTTGCATCTCGGTAATATACACTTTGAATTGGAC
GACGAGAGCGATGAAGACGGCGCCTATATTGATATAAACGACCCCCATATAATAACAGTA
TGCGCGCTTTTGGGCATATCGAAACCGGAAATATCAAGATGGCTGACACACAAGCGGATA
GCTTCCGCCCACGAGGTTATAGTGTCGAGGATGGACTTACAGAGGGCTGTCTTCGCGAGG
GACGCTCTGGCCAAGAGAATGTATGGGGAACTATTCGCATGGCTGGTACGAGCTGTGAAT
AGGGCCCTCGACACAGGGCATGCCAGAAAACACTTTATTGGTGTGCTGGACATATACGGC
TTCGAGACGTTCGAGATCAACTCGTTCGAGCAGTTCTGCATCAACTACGCCAACGAGAAG
CTGCAGCAGCAGTTTAACTCGCACGTGTTCAAGCTGGAGCAAGACGAGTATATTAAGGAA
CAAATATCATGGAAGATGATAGACTTCTACGACAACCAGCCCTGCATAGACCTGATCGAG
GACCGGTTAGGTGTGCTGGCCCTGCTGGACGAGGAGTGCCGCGTGCCGCAGGGCTCCGAC
CAGGGCTTCGTAGCCAAGCTACACGACAAGTGCTCCAAGTACCCGCACTTCATGAAACCG
AGGTTCGGCAACGCCGCCTTCATAATAAAACACTTCGCTGATAACGTTGAATACCAATGC
GGCGGGTTTCTGGAGAAGAATCGGGACACGGTTCTGGAGGAGCAGCTGGAGTGCGTGAAA
ACCGCGACCACCTGCAGGCTCATACACGTTATATTCGCTGAAGCCAGCGTCGACCACTCA
GCGACCCTACCACTACCCTCCAGAAGAAAGGCCACTCCATCCATGGCTCTAAGTAGCCTC
ACTCAACCTCCCCGTCGAGCATCCGGTCAGAAACAAACTGTGGGCTCTCAGTTCAGGGCG
TCCCTATCAGCTCTCATGGCGACCCTCTCCGCTACGACTCCACACTACGTGCGCTGCATC
AAGCCGAATGACACCAAGCAGCCGTTCCAGTTCGACGCGGCCAGGCGACAACAATTTTCC
AGAGCATGCGGCGTGTTGGAGACTATACGAATATCGTCAGCTGGATTCCCATCCAGGTGG
CTGTACCAGGACTTCTTCCAGAGATACCGTCTCCTCTGCCTTTACAAAGAGATAGATCGA
TCCAATATTAAGGCGACGTGCTCCAAAATATTGGAGAAACATTTGAAAGACCCGGATAAG
TTTCAGTTCGGTGCCACCAAAATATTCTTCAGGGCCGGGCAGGTGGCGTACCTGGAGAAG
ATCCGAGCTGATCTCCAACGTCTGTACTGCGTCCGTGTCCAGAGCTGTGTCCGAGGGTTC
CTTGCCAGGCGGCGGTACGCGAGGCTGCGGCGCGCGCTCATCGGACTACAGGCTAGAGGG
AGGGGATACCTTGTTAGACGAAAAGTTCAGGAGATCAGGCGTAACCGTGCTGCTATCAAG
ATCCAGAAGACAGTACGCGGCTGGCTGGCCCGGGTCAAGTTCCAGAGGATGAGGAAGCTG
GCGATTGGACTGCAAGCGGTGGCGAGAGGCTACCTGGCCAGGAGGCTGTATAAGAACAAG
AGGATACTTAAGGCTACTATCGGTATTCAGCGATACGCCCGCGGCTACCTCGTCCGCCAG
AGAGTCAGGAGGCGAAGGCAGCAAATCATTATCTGTCAGTCAGCGGTCCGTCGCTTCCTA
GCGCGTCGGCAATACAAGAGACTGCGCATAGAAGCTCGCAGCCTGGACCACGTCAAGTCT
TTGAACAAGGGTCTGGAAAACAAAATTATCAGTCTGCAACAGAGACTCAACGAGGAGATC
AAGAAATCCAGCGCCGTGGGACCTCTGCAAGCACAGAACACGGAGCTCAGATCGAAATTG
GAGAATCACAAGATATTGACAATAGAGGTGAAAGCTCTCAAAGTGGACATCGCGGCCAAG
GATAATCTGCTCGCCAAGCTGCAAGCGGAGCTGACGGCTGAGAGGGAAGCGAACAAACGT
CTGCTGGAAGAGAAGAAGACGATAGAAGTGGAATATAAGAAGAATAAAGATGAACTCGAA
GCGAACAGCGAGAAGCTGTCGAGCGAACTGGAGACGACCAAGGAGCACTACTCCATGCTT
ATATCTGATCGCGATAAACAACACGAGGATGAAAAGAGAGCTCTGCGGCTCGAGTTGGAG
AATGAGAGACAGAGTCGACAGAAGATGCTGTCGTCGCAGTACGAGATGCAGGAGAGGATC
GATACGTTACAGAGAGTTCCAGCCCCCAAAGAACACAGGCGATCTCTATCCGATGTCAGC
ATCAACTCACAGCAAGAGACGACAGTGGAAGATGACTTCGGTTACGGGTCTGTTCGCTCG
GTGGAGACCACTCGGCCGGCGCTGGAGGCGGTCAACTGGTCCGCTGGCCAGCACAACGGA
CCCATGCCGATCGCTGATGCTGGGCTGGTGCTTCGTATGCAGACGAGGATATCAGCTCTG
CAGGGTGAACTGGCGCGGACTACAAAGAGAGCTGCGGACCTGGAAGATAGACTCGCAAGT
ACGTTTTGTCCAAACCAGACCTTCTCAAAAACCCTTGCGGCACTACAGGCATGTAGGGGG
CGGTCGTCTCTCAGCGCCGGGCGGGCCGCGCCCCGACAGCGACCGGTTCAGGGTCGAAGA
GCTGGAGATGGAGAACAAGAAGCTGAGGGAACACCTGGACAGGCTGCGGGCCGCGGACAC
CTCGCTCTCACGGGAAGTGCTGGGTGA
Protein sequence:
MTTKELYTKVPRRIWVEHPELVWECATVTSDYRSGVLIVQTDQTGELRQIKITDESKMPP
LRNPSLLIGQNDLTSLSYLHEPAVLHNLKVRFCDRNAIYTYCGIVLVAINPYYDLPIYGD
ETIMAYRGQSMGDLDPHIFAVSEEAYTKLERERRDQSIIVSGESGAGKTVSAKYAMRYFA
AVGGNTSETHVERKVLASSPIMEAIGNAKTTRNDNSSRFGKFIEIHFDEMYRISGASMRT
YLLEKSRVVYQSSGERNYHIFYQLCAAKHLLPELKLDHQDTFHYLNQGGSPEIDGVNDLK
AFHETRNALTTLGVTESEQQNMFTVLAAILHLGNIHFELDDESDEDGAYIDINDPHIITV
CALLGISKPEISRWLTHKRIASAHEVIVSRMDLQRAVFARDALAKRMYGELFAWLVRAVN
RALDTGHARKHFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQDEYIKE
QISWKMIDFYDNQPCIDLIEDRLGVLALLDEECRVPQGSDQGFVAKLHDKCSKYPHFMKP
RFGNAAFIIKHFADNVEYQCGGFLEKNRDTVLEEQLECVKTATTCRLIHVIFAEASVDHS
ATLPLPSRRKATPSMALSSLTQPPRRASGQKQTVGSQFRASLSALMATLSATTPHYVRCI
KPNDTKQPFQFDAARRQQFSRACGVLETIRISSAGFPSRWLYQDFFQRYRLLCLYKEIDR
SNIKATCSKILEKHLKDPDKFQFGATKIFFRAGQVAYLEKIRADLQRLYCVRVQSCVRGF
LARRRYARLRRALIGLQARGRGYLVRRKVQEIRRNRAAIKIQKTVRGWLARVKFQRMRKL
AIGLQAVARGYLARRLYKNKRILKATIGIQRYARGYLVRQRVRRRRQQIIICQSAVRRFL
ARRQYKRLRIEARSLDHVKSLNKGLENKIISLQQRLNEEIKKSSAVGPLQAQNTELRSKL
ENHKILTIEVKALKVDIAAKDNLLAKLQAELTAEREANKRLLEEKKTIEVEYKKNKDELE
ANSEKLSSELETTKEHYSMLISDRDKQHEDEKRALRLELENERQSRQKMLSSQYEMQERI
DTLQRVPAPKEHRRSLSDVSINSQQETTVEDDFGYGSVRSVETTRPALEAVNWSAGQHNG
PMPIADAGLVLRMQTRISALQGELARTTKRAADLEDRLASTFCPNQTFSKTLAALQACRG
RSSLSAGRAAPRQRPVQGRRAGDGEQEAEGTPGQAAGRGHLALTGSAG