| New model in OGS2.0 | DPOGS212481 |
|---|---|
| Genomic Position | scaffold1116:+ 34971-55397 |
| See gene structure | |
| CDS Length | 1656 |
| Paired RNAseq reads | 2730 |
| Single RNAseq reads | 7584 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009653 (5e-08) |
| Best Drosophila hit | gemini, isoform C (7e-82) |
| Best Human hit | upstream-binding protein 1 isoform b (6e-58) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC009932 [Tribolium castaneum] (2e-96) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009932 [Tribolium castaneum] (5e-93) |
| GeneOntology terms | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0045449 regulation of transcription |
| InterPro families | IPR007604 CP2 transcription factor |
| Orthology group | MCL10687 |
Nucleotide sequence:
ATGCATGACGGTCGTAAGGAGGACTTCGCTTGGGAGTCTTCTGTGAAGTTGACACTAGTT
GGTTCTGAGGACTTGGGGATGTATTTAGAGGAAAGGGAAAGGGAGGGAAGGAAGCGCAAG
TGGCAGGAGGGGAAGATGCGCAGGGAGGAGTTGGAGGAGAAGGAGCAAAGGAAGATGCCG
CCCAAGAAGGTCATGGCTAACCTCGATTTGGGGGGTAGCGGCACCAGCTCCTCCTCGTCA
CACCTTTCCCCGGGATGGCAGGTCAATGACCTGGATCTTGATTTACCCGGGGAACTTTCC
ATGAATGAGGCCCTACTGTCGTTGCCGTCACTGGCCGTGTTCAAGCAAGAGGCGCCTTCT
CCAACTGGGAACGCACTGTCTCCGCCGCGCAGGACCTGGCCCGTGAGGCGTACTGATGAC
AGACAGATAACCAATATGGTTGTGGACAACCGGGATGCCATGGACGAGGGCTGCCAGCAA
CACGCTGGAGTCATGAACACGCAATCCAATAGCCCGGAAAGCATGCAGTGCCAAACCATG
CCAGTCATAATGCCAATTAATGGCTACCATTCTCCTAGTGGACAAGAAAATAAAAGTAAT
GAGGCCCTACTGTCGTTGCCGTCACTGGCCGTGTTCAAGCAAGAGGCGCCTTCTCCAACT
GGGAACGCACTGTCTCCGCCGCGCAGGACCTGGCCCGTGAGGCGTACTGATGACAGACAG
ATAACCAATATGGTTGTGGACAACCGGGATGCCATGGACGAGGGCTGCCAGCAACACGCT
GGAGTCATGAACACGCAATCCAATAGCCCGGAAAGCATGCAGTGCCAAACCATGCCAGTC
ATAATGCCAATTAATGGCTACCATTCTCCTAGTGGACAAGAAAATAAAAACGCTGGTCTT
CTGATGTGTTCTCCGGCCAGCTCTCTGGATGGCTTCCTGCACTCTCCGAGGCCCGACTCC
GGCTTCAAAGACGACAACAGATTCCAATACGTCCTAGCGGCGGCTACGTCCATAGCGACC
AAACAGAACGAAGAGACGTTGACTTACTTGAACCAGGGACAGCCTTACGAGGTCAAGCTG
AAGAAGCTCGGAGACCTCGCGCACTACAAGGGGAAGATACTGAAGAGTATAATAAAGATC
TGCTTCCACGAGCGCCGTCTGCAGTACATGGAGAGAGAACAAATAGCACAGTGGCACAAC
GACAGGCCGGGAGAGAGGATATTAGAGGTGGACGTACCGCTATCGTACGGTGTATCACGC
GTGGAGCAACCAGCTGCCCTCAATGAACTACATGTACACTGGGACCCGACCAAAGATGTC
GGGGTGTACGTTAAAGTGAACTGCATATCAACAGAATTCACAGCCAAGAAACATGGCGGT
GAAAAGGGAGTGCCGTTCCGTATCCAGGTGGAGACGATGTATGAGGACAGGCGACTGCAT
ACAGCTGCCTGCCAGATTAAGGTCTTCAAGTTGAAGGGCGCTGATCGTAAACACAAGCAG
GACCGGGAACGAGTACTGAGAAGGCCCAGGTCCGAGGTGGAGAGGTATCAACCTGGGTGT
GACGCAACTGTCCTGACGACGCTATCTAACGACGCTCTGATGCCACCGCCTTCCCTTGTG
ACAACATCACCCCCATACTCCCCAGAGATGTGGTAA
Protein sequence:
MHDGRKEDFAWESSVKLTLVGSEDLGMYLEEREREGRKRKWQEGKMRREELEEKEQRKMP
PKKVMANLDLGGSGTSSSSSHLSPGWQVNDLDLDLPGELSMNEALLSLPSLAVFKQEAPS
PTGNALSPPRRTWPVRRTDDRQITNMVVDNRDAMDEGCQQHAGVMNTQSNSPESMQCQTM
PVIMPINGYHSPSGQENKSNEALLSLPSLAVFKQEAPSPTGNALSPPRRTWPVRRTDDRQ
ITNMVVDNRDAMDEGCQQHAGVMNTQSNSPESMQCQTMPVIMPINGYHSPSGQENKNAGL
LMCSPASSLDGFLHSPRPDSGFKDDNRFQYVLAAATSIATKQNEETLTYLNQGQPYEVKL
KKLGDLAHYKGKILKSIIKICFHERRLQYMEREQIAQWHNDRPGERILEVDVPLSYGVSR
VEQPAALNELHVHWDPTKDVGVYVKVNCISTEFTAKKHGGEKGVPFRIQVETMYEDRRLH
TAACQIKVFKLKGADRKHKQDRERVLRRPRSEVERYQPGCDATVLTTLSNDALMPPPSLV
TTSPPYSPEMW