| New model in OGS2.0 | DPOGS211547 |
|---|---|
| Genomic Position | scaffold3487:- 54-6771 |
| See gene structure | |
| CDS Length | 2631 |
| Paired RNAseq reads | 578 |
| Single RNAseq reads | 1399 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009491 (2e-178) |
| Best Drosophila hit | small optic lobes, isoform A (4e-08) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to small optic lobes protein [Nasonia vitripennis] (1e-20) |
| Best NR hit (blastx) | Calpain D, putative [Pediculus humanus corporis] (3e-35) |
| GeneOntology terms | GO:0007399 nervous system development GO:0007632 visual behavior GO:0004198 calcium-dependent cysteine-type endopeptidase activity GO:0008270 zinc ion binding GO:0006508 proteolysis GO:0005622 intracellular GO:0005737 cytoplasm |
| InterPro families | IPR001876 Zinc finger, RanBP2-type |
| Orthology group | MCL21761 |
Nucleotide sequence:
ATGGGTTCAATCGCATCGGTGCTGCAATGGCATTGTCAGACATGCGGACAAATCAATCCT
ACAGAGAGTGTGAAATGTTTAAAATGTGGTATAAAGAGGATATCTGGTCATGACAGTGAT
ATACAAAAACGTTATCATACCGGTGATTCGTCCTCGGAATACGCTTCGCGGACTGAAAAA
AGCGAAGGGACGACTCCAGGTTCTGAAGCCATCATTATACCAACAACAAACAATTTTAAT
AGCGGTTGGTCATGTGTGGGCTCAGCTCCGCTGGCCAGCAGATCGTGGCGTTGTGGCTGC
GGTCTTAGGAATGTATCAGCTTCATGGCGATGTGCCGCTTGCGACAAAATCGCCTCACAT
GCTCCCGTTTACAGATTATCCGATGACGAGGATCAATCTTCAGGGATGACTGACAAGAAT
AAGTCTGATCAAGATCACAGTATGATAAGATCCAACACTCTAGCAGTTCCATCGTATAAG
CCTTCGTCGAGTTATTCCGGTGGTCCTTTGAATTTGGACGTTCAGTCTCTTAGGTTGTCT
CCGACTCAGATCACCGATCACGCCCACGGAGTCACCAGGTCCCTGTCGCACGGTTCCGTG
ATCAATTCACAGCACAAATGGTGGAATGTTGATGAAACCAGAAGTACCATCAACAGACCC
ACGAGCTTATTGGTCTCGGAGAGATATGGCACGTCTTCGTATAACCCAAGGGAGTCGTTT
CTGAGAAGCCTTCACACAGTGACGCGTCGTCCCAAAAAGTGTAACGAGAGCAAATCCAAT
TGGGAGTTGAATTATGTCAAGGAATACCAAAGGGAACAAACGAGGGGATTGCATCTGAAG
AAGTGGGCCTGCAGTAAATGTACTCTCGAAAATTCAGGGATCAGAACCCACTGTGAAGCC
TGCTTGTCTCCAAGAATCTCACCCCTGGCACGTGTTTCTAATACAAGAGGTCTTAGTGTC
ACAACTCTGGGAAGACATGAGACTTTGAGTGGTAAAGATGGTGCTACTTCTTTGCCAACG
TCGGGAGGCATTATGATAACAGTACCAGATTGGCCGCAGACTGAAAATAACTTGGGAGAC
TCCTTTCAGAGGTCAATCAGTGCTCAAAATTCACCGGAAACCAGACCGACTTATCGACGC
TCGTTTTCTGAACAGACCAGCGAAACTAGACCCGTCGGTAAAGTGATATCTAGTAGGAGA
AGTCTAAACGATTATCAGAAATCGCTCGCCAGCTATTGCAACACACTGACGAAAAGCGAC
GAAGTCTCAGAGAAAAAAATCGATGAAAGCAACGCTGAATTAATAGACAAGGAATGCAGT
TGGGATACTAACGCGGAAGGTGTCATATACGCGCTACCCAACAAGGGAAAGTACAAAGAT
CTCAACCTGCAACTACAGGTCAACAACAATGGCACCAGATATTCGTACGTTTCGGTCCAA
GACACGAAAACTGTTATGAGCAATTCACAAAACGAAGTTTTATACTCCAACGACATGGGT
GACGGCGACTATGCCAGAATCGATGAGCTGTTGGGAGCCGAAAATTGTATTTCTCCAGTT
GGTGATAGTAATATAAGGACTTCTCATATCGGTGCGGGCAAAGAAGCAGGCAAAGTGTAT
AATATGTTGCCATCCGTCGGCAAAGTGTCTCACAACCCGCGCGAATCAGCCAAAGTGCCT
ACCGCTCAACAAGCTTCTCGCGAGGGTGTGGGAGCGGGGGCCACTCGTATGTGGCAGTGC
GGGGAGTGTTGGTTCGCGTACAACGCGTGGGGCGCGAGGTGCGATGTGTGTCGCAGTGCT
CGAGCTCCGCACGCCGTCACGCTGGCGCCCGGACTGGAGCGAGATGCGCGGAGCAGACAC
AATTCATCATCGGAAGCCAGCGGCAAACAGGAAACGAACCGAAACGAACCGCCGAAGAAG
TTAACAGTCCCTATAGCGGCGCTCGACCACGACCTCAACAGTGACGAACTACTGTTCGCT
GTTGAATCTACTCCACCTCCTGAGACCTCGTGGACCTGTGTCCGTTGTACTCTGGACAAT
GAACCGGAAGACTCGTCGTGTGCAGCGTGCGCCGCCTCCAGACCCACCGATAACTACTGG
TCGTGCAGTTCGTGCACTCTCCGCAACCCGATCTCGTGGCGCGTGTGTCGCGCGTGTAAG
ACCCCGCCCGTCCCGCGCCACGGCCCGCCCGCCGCCGCCGATAATAACAGTCGCAGCCCT
TCACGCCTGACTCCGCCGCGGAGAGTCCCGCGACACAAGACGCCTCCGCCCGAACAGAAG
CCGGAGCCGGCTGAGTGGTCGTGTTCTGAGTGTACGTATGTTAACTCCGGAGCCGCGCTG
GCCTGCGACATGTGTCAGTCACCGCGAGCCAGGCTGCTGCCCGCCGCGCCCGACCAGGCC
TCGCTGGACGACGACGACTCGCCGGAGGGCTCGGACGGCGAGCGCCAGGACAGCACGCCC
ATGGAGATACTGAGGCTGAGGGAGGAGAGCCACGCCTGGGCACAGTGGCAGGAGGTCATG
GCGCAGTGTGCCGCGGTCAGTGACACGCACATACCTCCTACACAATACTATACAGGGACT
AACCGAATGATTACAATCCGTACTCCCTACAGACTGGTGAGATGTACGTAG
Protein sequence:
MGSIASVLQWHCQTCGQINPTESVKCLKCGIKRISGHDSDIQKRYHTGDSSSEYASRTEK
SEGTTPGSEAIIIPTTNNFNSGWSCVGSAPLASRSWRCGCGLRNVSASWRCAACDKIASH
APVYRLSDDEDQSSGMTDKNKSDQDHSMIRSNTLAVPSYKPSSSYSGGPLNLDVQSLRLS
PTQITDHAHGVTRSLSHGSVINSQHKWWNVDETRSTINRPTSLLVSERYGTSSYNPRESF
LRSLHTVTRRPKKCNESKSNWELNYVKEYQREQTRGLHLKKWACSKCTLENSGIRTHCEA
CLSPRISPLARVSNTRGLSVTTLGRHETLSGKDGATSLPTSGGIMITVPDWPQTENNLGD
SFQRSISAQNSPETRPTYRRSFSEQTSETRPVGKVISSRRSLNDYQKSLASYCNTLTKSD
EVSEKKIDESNAELIDKECSWDTNAEGVIYALPNKGKYKDLNLQLQVNNNGTRYSYVSVQ
DTKTVMSNSQNEVLYSNDMGDGDYARIDELLGAENCISPVGDSNIRTSHIGAGKEAGKVY
NMLPSVGKVSHNPRESAKVPTAQQASREGVGAGATRMWQCGECWFAYNAWGARCDVCRSA
RAPHAVTLAPGLERDARSRHNSSSEASGKQETNRNEPPKKLTVPIAALDHDLNSDELLFA
VESTPPPETSWTCVRCTLDNEPEDSSCAACAASRPTDNYWSCSSCTLRNPISWRVCRACK
TPPVPRHGPPAAADNNSRSPSRLTPPRRVPRHKTPPPEQKPEPAEWSCSECTYVNSGAAL
ACDMCQSPRARLLPAAPDQASLDDDDSPEGSDGERQDSTPMEILRLREESHAWAQWQEVM
AQCAAVSDTHIPPTQYYTGTNRMITIRTPYRLVRCT