| Genomic Position | scaffold13174:+ 5652-6820 |
|---|---|
| See gene structure | |
| CDS Length | 1053 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 0 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011163 (2e-27) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (1e-97) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (7e-96) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGTCCAACATATACAAAATTTTCGCTAAAATCATCTTGAAACGAATTGAAAGAACACTG
GATGAACACCAACCCATCGAACAGGCAGGTTTTCGGAAAGAATACTCTGTGATTGACCAC
ATTCATGTAGTTTGGCAAGTTTTAGAGAAGTACAGAGAATACCAGCTCACATACTATATT
GCATTCATTGATTACAGTAAAGCCTTCGATTCTTTGATATATGAAAACATTTGGAAAGCT
GTAGAAGAGCAAGGGATAGCACATAATTATATTCGTCTAATAAGGAACATATACAGCCAC
AGCACAGCCAGAATCCAGTTAGAGAAGAAAGGTCGCTCATTCAAAATAGGAAAGGGGGTC
AGCCAAGGAGACCCCTTATCGTCTAAACTATTTTCGGCTGTACTGAAATCAATATTCAGG
CAACTCAGTTGGGAAAATTCGGGAATCAACGTTGACGGCACATCTCTAACACATCTAAGG
TTCGCTGATGACATAGTCCTATTTGCTAAAACATCTGAAAAAATTAGTAAAATGATAGCA
GACCTCGCGGTCGAAAGTGAAAAGGTCATAACGCATAAAAAACAGATGCACGACGAGATA
AAAAGAAGAATCACAAACGAATTCAAAAGATACTGGAGCTTTAAAGAAGTTATGAAAGAC
ATAATTATTCATATCAATACCAAAAAAAAACTTTTCACTACTTGCATACTGCCTGTCCTT
ATATATGGCTGCCAATCTTGGACTACAACCCAAGAATTGATAAGCGAACTTACAACTTGC
CAATACGCTATGGAGAGGAGTATCGAGTATCTGACGATCAAAAGACTGAAATGGAGATGG
GCAGGCCATATGATAAGAGGTCATGATAAATGGAGCAAGAAAGTAACAATATGGTACCCA
AGGGAAGGGAAAAGAAAGAGAAGGAGATCTCAAAAACGATGGGACGACGACATCAAAGAG
GTGGCAGGTGTGATGTGGAATAGAGTAGCTCAAGTAAGGACTGAGTGGAAACGATTGGAG
AAGGCCTTTGCCGATTTTGGCGTTGGGACGTGA
Protein sequence:
MSNIYKIFAKIILKRIERTLDEHQPIEQAGFRKEYSVIDHIHVVWQVLEKYREYQLTYYI
AFIDYSKAFDSLIYENIWKAVEEQGIAHNYIRLIRNIYSHSTARIQLEKKGRSFKIGKGV
SQGDPLSSKLFSAVLKSIFRQLSWENSGINVDGTSLTHLRFADDIVLFAKTSEKISKMIA
DLAVESEKVITHKKQMHDEIKRRITNEFKRYWSFKEVMKDIIIHINTKKKLFTTCILPVL
IYGCQSWTTTQELISELTTCQYAMERSIEYLTIKRLKWRWAGHMIRGHDKWSKKVTIWYP
REGKRKRRRSQKRWDDDIKEVAGVMWNRVAQVRTEWKRLEKAFADFGVGT