| New model in OGS2.0 | DPOGS200944 |
|---|---|
| Genomic Position | scaffold548:- 10290-11147 |
| See gene structure | |
| CDS Length | 858 |
| Paired RNAseq reads | 372 |
| Single RNAseq reads | 1004 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010209 (4e-151) |
| Best Drosophila hit | CG14213, isoform A (2e-119) |
| Best Human hit | cell differentiation protein RCD1 homolog (9e-132) |
| Best NR hit (blastp) | cell differentiation protein RCD1 homolog [Bombyx mori] (3e-165) |
| Best NR hit (blastx) | cell differentiation protein RCD1 homolog [Bombyx mori] (7e-151) |
| GeneOntology terms | GO:0005515 protein binding GO:0005634 nucleus GO:0007548 sex differentiation GO:0045449 regulation of transcription GO:0019221 cytokine-mediated signaling pathway |
| InterPro families | IPR007216 Cell differentiation, Rcd1-like IPR011989 Armadillo-like helical IPR016024 Armadillo-type fold |
| Orthology group | MCL13895 |
Nucleotide sequence:
ATGCAGGCAGCCGTGGATCGCGAAAAGATATACTCATGGATTTTAGAACTATGCAATCCA
GAAACACGTGAAAATGCACTTTTGGAACTGAGTAAAAAGCGTGAAGTTGTACCAGATTTG
GCGCCAATGCTATGGCACAGCTTCGGAACTATTGCAGCTTTGTTACAGGAGATCACTAAC
ATTTACGTGGCCATGATACCACCGACGCTTACGGCCCACCAGAGCAACCGAGTCTGCAAC
GCTCTGGCTCTTATGCAATGTGTGGCATCACATCCAGAGACGAGATCTGCATTTCTTCAA
GCTCATGTACCTCTGTTCCTGTATCCTTTCCTCCACACTGTGTCAAAGACGCGTCCATTT
GAATACCTGCGCCTTACCAGTCTAGGAGTTATTGGTGCTCTAGTCAAAACTGATGAACAG
GAAGTCATCACATTTCTATTGACAACAGAAATTATACCATTGTGCCTGCGCATCATGGAA
AATGGATCTGAGCTGTCCAAAACAGTAGCAACATTTATATTACAGAAAATTCTCCTGGAT
GATAGCGGTCTGAGTTATATTTGCCAAACGTATGATAGATTTTCTCATGTCGCTATGATA
TTAGGAAAAATGGTGTTGTCATTGGCTAAAGATCCATCTGCAAGATTGCTAAAACATGTG
GTCCGTTGCTATCTCCGTTTGTCTGACAACCCTAGAGCTAGGGAAGCTTTAAGACAGTGT
CTTCCGGATCAATTACGTGATGCGACATTCACTGCATGCCTTCAAGAAGACAACTCAACT
AAACATTGGTTGGCTCAACTGATTAAGAACTTGGAAGCCCAGCCGCCACCAGCAAGTCCC
GCCCAACAGAATATGTGA
Protein sequence:
MQAAVDREKIYSWILELCNPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEITN
IYVAMIPPTLTAHQSNRVCNALALMQCVASHPETRSAFLQAHVPLFLYPFLHTVSKTRPF
EYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMENGSELSKTVATFILQKILLD
DSGLSYICQTYDRFSHVAMILGKMVLSLAKDPSARLLKHVVRCYLRLSDNPRAREALRQC
LPDQLRDATFTACLQEDNSTKHWLAQLIKNLEAQPPPASPAQQNM