| New model in OGS2.0 | DPOGS205173 |
|---|---|
| Genomic Position | scaffold5961:- 7113-11244 |
| See gene structure | |
| CDS Length | 1050 |
| Paired RNAseq reads | 74 |
| Single RNAseq reads | 320 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001273 (1e-88) |
| Best Drosophila hit | CG4335 (3e-55) |
| Best Human hit | trimethyllysine dioxygenase, mitochondrial isoform 1 precursor (7e-50) |
| Best NR hit (blastp) | trimethyllysine dioxygenase, putative [Pediculus humanus corporis] (6e-77) |
| Best NR hit (blastx) | trimethyllysine dioxygenase, putative [Pediculus humanus corporis] (9e-77) |
| GeneOntology terms | GO:0008336 gamma-butyrobetaine dioxygenase activity GO:0031418 L-ascorbic acid binding GO:0055114 oxidation reduction GO:0005506 iron ion binding GO:0045329 carnitine biosynthetic process GO:0050353 trimethyllysine dioxygenase activity |
| InterPro families | IPR012776 Trimethyllysine dioxygenase IPR003819 Taurine catabolism dioxygenase TauD/TfdA |
| Orthology group | MCL17940 |
Nucleotide sequence:
ATGGAGCGTCATGGCAGAGGATGGGTGAGGTCTGTGATGATGAGATGTTCGTCTTGCTAT
CGCTCTGATACTTTTCAAAAAGCTAATTACCTATTAGAACTATCAGGCATCAAGATAAGC
ACTTTTAAATTCGACGCTTGTAATCTATACATCGAATGGAATGACAAACATCAGTCGACA
TACGAAGCATCTTTTTTAATAAAATTTCAATATGATAAATGGAAAGACAGTAGAAAACTA
AGACCAATATTATGGAAAGGTGTGGACATTGAAAATAAAATAGCAAAGGTTCATGCCCGT
GAATTCCTTAACACCGAGAGTGGTGCTATCACAGTATTCAAATCTCTAATAGACTACGGC
GTTGCTTTAATTGATCAGGTAGGTGTATCTCTGGAAGCTACGGAACAGGTGTGCAAAGCG
TTAGGTGGTGTACAACATACCTTATTTGGAGGCATGTGGCAGTTTACCTCCGTCCAGGAC
CACGCTGACACCGCTTACACGAATCTGCCATTAGCTGTGCACAATGATAACACTTACTTC
AACGAGGCAGCTGGCCTCCAGATACTGCATTGCCTGGAACATTCCAATGGAGAAGGCGGA
GAAACAATTTTAGTTGATGGTTTTTTTGGAGCTACGAAATTGAAAAATGAATTCCCTGAG
GACTTTGAATTCTTGACTAATTTTAATTTAGACGCGGAATATTTGGAAGATGGTCATCAT
TATAAATATTCGGCACCTGTTATAAATGTTGACAAGGAAAAGAATTTGGAACAAATAAGG
TTTAATGTTTACGACCGCTCACCGATGGCATTCTCTAGTGGTGAGGAATGCAGGTCATAC
TACCGCGCGCTATGGAATCTCTCGACCTATTACCAAAATACCGACTGTCAATGGAAATTT
AAATTATACCCAGGTTTGGTGATGGTGATGGACAACTTCAGAGTACTTCATGGAAGAACA
GCTTTCACAGGAAATCGCATAGTATGCGGTAGTTACGTGTCACGTTCCGATTGGCTTAAT
AAAGCACGAGCTTTGAAACTTATACAATAG
Protein sequence:
MERHGRGWVRSVMMRCSSCYRSDTFQKANYLLELSGIKISTFKFDACNLYIEWNDKHQST
YEASFLIKFQYDKWKDSRKLRPILWKGVDIENKIAKVHAREFLNTESGAITVFKSLIDYG
VALIDQVGVSLEATEQVCKALGGVQHTLFGGMWQFTSVQDHADTAYTNLPLAVHNDNTYF
NEAAGLQILHCLEHSNGEGGETILVDGFFGATKLKNEFPEDFEFLTNFNLDAEYLEDGHH
YKYSAPVINVDKEKNLEQIRFNVYDRSPMAFSSGEECRSYYRALWNLSTYYQNTDCQWKF
KLYPGLVMVMDNFRVLHGRTAFTGNRIVCGSYVSRSDWLNKARALKLIQ