New model in OGS2.0 | DPOGS213102  |
---|---|
Genomic Position | scaffold1526:- 21840-23393 |
See gene structure | |
CDS Length | 552 |
Paired RNAseq reads   | 309 |
Single RNAseq reads   | 1243 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007862 (1e-79) |
Best Drosophila hit   | CG7375 (1e-78) |
Best Human hit | NEDD8-conjugating enzyme Ubc12 (5e-86) |
Best NR hit (blastp)   | ubiquitin-conjugating enzyme E2M [Bombyx mori] (4e-102) |
Best NR hit (blastx)   | ubiquitin-conjugating enzyme E2M [Bombyx mori] (3e-102) |
GeneOntology terms    | GO:0004842 ubiquitin-protein ligase activity GO:0006464 protein modification process GO:0018169 ribosomal S6-glutamic acid ligase activity GO:0019788 NEDD8 ligase activity GO:0045116 protein neddylation |
InterPro families    | IPR016135 Ubiquitin-conjugating enzyme/RWD-like IPR023313 Ubiquitin-conjugating enzyme, active site IPR000608 Ubiquitin-conjugating enzyme, E2 |
Orthology group | MCL13989 |
Nucleotide sequence:
ATGATTAAACTGTTTTCCTTAAAACAACAAAAAAAAGATGAAGAAGGTTCAGCAAGAGCA
GGCGGTTCACAAAAGAAAGCATCGGCGGCTCAATTACGAATCACAAAAGATTTAAATGAA
CTGAACCTGCCCAAAACCTGTAGCACAGAATTTCCAGACCCAGATGATTTACTTAATTTC
AAATTGATCATATGTCCTGATGAAGGTTTTTACAGAGGAGGAAGATTTGTATTTAGCTTT
AAGGTAGGACCAAACTATCCCCATGAACCACCTAAAGTTAAGTGTGAGACGGCTGTATAT
CACCCAAATATAGACTTGGAAGGGAATGTCTGCTTGAATATACTCCGAGAAGATTGGAAA
CCAGTGCTCACAGTCAACTCAATAGTATATGGGTTGCAGTATCTATTCCTGGAACCAAAT
CCTGAAGACCCACTGAATAAAGAAGCGGCTGATGAACTACAAAGCAATCGACGACTTTTC
GAACAACACGTGCAGAGAGCAATGCGCGGCGGATATGTCGGCTCTTCTTATTTTGAACGG
TGCCTCAAATGA
Protein sequence:
MIKLFSLKQQKKDEEGSARAGGSQKKASAAQLRITKDLNELNLPKTCSTEFPDPDDLLNF
KLIICPDEGFYRGGRFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWK
PVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGSSYFER
CLK