| New model in OGS2.0 | DPOGS201129 |
|---|---|
| Genomic Position | scaffold73:- 181825-185806 |
| See gene structure | |
| CDS Length | 1284 |
| Paired RNAseq reads | 1747 |
| Single RNAseq reads | 4547 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007298 (4e-22) |
| Best Drosophila hit | Autophagy-specific gene 18, isoform B (4e-92) |
| Best Human hit | WD repeat domain phosphoinositide-interacting protein 2 isoform d (7e-97) |
| Best NR hit (blastp) | WD repeat domain phosphoinositide-interacting protein, putative [Pediculus humanus corporis] (6e-122) |
| Best NR hit (blastx) | WD repeat domain phosphoinositide-interacting protein, putative [Pediculus humanus corporis] (1e-101) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL15672 |
Nucleotide sequence:
ATGAGTTTGGGAGGAGGTCATAGCACAGAGGGATCAAATGCAGGAGGAATATTTGTACAA
TTCAACCAGGACTGCACGTCGCTGGTGGCCGGCAGCAGTAGCGGCTACCACCTGTTCGCG
CTCACTCCGGACGATGGTGTGGAGGAGATCTACGCCAGTCGCTCAGGACTCGACACGTGC
TTCGTGGACCGTCTCTTCAGCAGCTCGCTGGTGGCCGTGGTCACAGTCTCCGCTCCGAGG
AAGTTAATAGTATGTCACTACAAGAAAGGCACCGAGATATGTAACTACAGCTACAGCAAC
ACTATACTCGCCGTCAAGCTGAACAGATCCAGGCTGATCGTGTGTCTGGAGGAGTCGCTG
CACATCCACAACATCCGCGACATGAAGATCCTGCACACAATCCGGGACACGCCTCCCAAC
CCTCGAGGACTGTGCGCGCTGTCCCCTTGCGTCGAGAGATGTCTCGTGGCGTACCCCGGA
TCGAGCGCGGTGGGGGAGGTGCAGATCTTCGACGCCGTCCACCTGAACGCCAAGTGCGTG
ATTGGAGCCCACGACAGTCCCCTGGCCGCCCTGGCCTGGTCCATGTGCGGGAAACGCCTC
GCCACCGCCTCCGAGCGCGGGACGGTGATTCGCGTATTCGCGGTGCCCGAGCGCACGCGA
CTCTACGAGTTCCGACGTGGCGTGAAGCGCTGCGTGTCCATAGCCTGCCTGGCCTTCAGC
GCCTGCGGGGCGTACCTGGCGGCCACCTCCAACACGGAGACCGTGCACGTGTTCCGGCTG
AGGGAGGGCGCACCGCCGCCGCCCGCAGAGGACGCGGCCGCGCCGCCCGACGGCTGGATG
GACTGGCTGTCACAGGCGGTGTCGCGCGGCGTCACCTACCTGCCGCCGCAGTTCACGGAC
GTGCTGACTCAGGGCCGAGCGTTCGCCGCGGCTCGTCTCCCGCGGCCCGCGCGCCACGCC
GTGGCCGCCGTCACGAGCTCGGCACGCGCCCTGCGGCTGGTGGTGGCCACGGCGGACGGG
GACGTGTACGTCTTCGGTCTGGACGCGGCCGAGGGCGGCGAGTGTCCGCTGCTACGCACC
CACCGCCTGCTGGAGCGCTCTCCCTCCGTCACCGAAGGTACGTGTCATGTCGTGTCGTCT
GGCGTCGTGTCGTGTCGTGTCGGCCGTGCGCACACGCGCGTCTCCTCGTCTCTCCCCGCC
TCACCTCACCTCTCGTTTCTGTTTCTGATCCTTGAAGCCGCTGCTCCTACTACGTTTTTA
TTATTATTGTTTGATTCCTTTTAG
Protein sequence:
MSLGGGHSTEGSNAGGIFVQFNQDCTSLVAGSSSGYHLFALTPDDGVEEIYASRSGLDTC
FVDRLFSSSLVAVVTVSAPRKLIVCHYKKGTEICNYSYSNTILAVKLNRSRLIVCLEESL
HIHNIRDMKILHTIRDTPPNPRGLCALSPCVERCLVAYPGSSAVGEVQIFDAVHLNAKCV
IGAHDSPLAALAWSMCGKRLATASERGTVIRVFAVPERTRLYEFRRGVKRCVSIACLAFS
ACGAYLAATSNTETVHVFRLREGAPPPPAEDAAAPPDGWMDWLSQAVSRGVTYLPPQFTD
VLTQGRAFAAARLPRPARHAVAAVTSSARALRLVVATADGDVYVFGLDAAEGGECPLLRT
HRLLERSPSVTEGTCHVVSSGVVSCRVGRAHTRVSSSLPASPHLSFLFLILEAAAPTTFL
LLLFDSF