New model in OGS2.0 | DPOGS201138  |
---|---|
Genomic Position | scaffold73:- 32000-32752 |
See gene structure | |
CDS Length | 753 |
Paired RNAseq reads   | 210 |
Single RNAseq reads   | 1549 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003956 (1e-56) |
Best Drosophila hit   | CG4842 (2e-19) |
Best Human hit | 15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (4e-17) |
Best NR hit (blastp)   | alcohol dehydrogenase [Heliothis virescens] (4e-90) |
Best NR hit (blastx)   | alcohol dehydrogenase [Heliothis virescens] (2e-81) |
GeneOntology terms    | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0008152 metabolic process GO:0003824 catalytic activity GO:0055114 oxidation reduction GO:0005575 cellular_component |
InterPro families    | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain |
Orthology group | MCL10279 |
Nucleotide sequence:
ATGGCAAGAGAGCTAAATAATAAAGTTGTCGTAATAACGGGAGGTGCGGTTGGTATCGGC
TGCGAGATAGCAGGAAGATATTTACAAAGAGGTGCTAAGGTCACTATAATTCTTGACATT
GACGAAATACAAGGACAAGAGACCGCGAGGAATCTCTGCACAAAATACGGTGCTAATAGA
GCAATTTTTATGAAATGCGATGTCACTACGGATTTAGAAACGGTTTCAAAGAAAATCTTC
GAAAGTTTTAAGAATGTTGATGTACTGGTAAACAACGCTGGTATATTAAATGTCCAATCG
TCGAAAAATACAATCGACGTCAATATTCAAGCTCTAATTGATTGGTCCATAACATTTTGG
AATCATATGCGGAAAGAGAAAAATGGTAAAGGAGGTACAATACTTAATTTAGCCTCTATT
TATGGATATAGAGTGGATCCATATCTACCCGTCTATCAAGCTTCGAAGTTCGCTGTTATG
GGTTTTACAAAATCTTTAGGTCATGAATATAATTACCGCAGAACAGGAGTCAGGGTTATT
GCTATATGTCCTGGCTTCACTGAAACTAAACTAACAACTGGGGTCAAGACTTGGGACGAT
GAATACATAGCCGAAGATTTCTCAAATTTTGTTCAAAAGCAGTTATGGCAAAAAGTGGAT
GCGGTCGGCAACGCTGCTGTAGAGGCTTTCGAAAAAGGAAACAGCGGAACTGCGTGGTTA
ATAGAAGGAGGAAATCCCATCGCTGAGGTTTAA
Protein sequence:
MARELNNKVVVITGGAVGIGCEIAGRYLQRGAKVTIILDIDEIQGQETARNLCTKYGANR
AIFMKCDVTTDLETVSKKIFESFKNVDVLVNNAGILNVQSSKNTIDVNIQALIDWSITFW
NHMRKEKNGKGGTILNLASIYGYRVDPYLPVYQASKFAVMGFTKSLGHEYNYRRTGVRVI
AICPGFTETKLTTGVKTWDDEYIAEDFSNFVQKQLWQKVDAVGNAAVEAFEKGNSGTAWL
IEGGNPIAEV