| New model in OGS2.0 | DPOGS200705 |
|---|---|
| Genomic Position | scaffold1163:+ 19318-25687 |
| See gene structure | |
| CDS Length | 1605 |
| Paired RNAseq reads | 1340 |
| Single RNAseq reads | 4262 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005240 (0.0) |
| Best Drosophila hit | amylase proximal (5e-163) |
| Best Human hit | pancreatic alpha-amylase precursor (9e-141) |
| Best NR hit (blastp) | alpha-amylase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | alpha-amylase [Helicoverpa armigera] (0.0) |
| GeneOntology terms | GO:0004556 alpha-amylase activity GO:0005509 calcium ion binding GO:0005975 carbohydrate metabolic process GO:0003824 catalytic activity GO:0043169 cation binding |
| InterPro families | IPR015902 Alpha amylase IPR006046 Glycoside hydrolase, family 13 IPR017853 Glycoside hydrolase, superfamily IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic domain IPR006048 Alpha-amylase, C-terminal all beta IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR013780 Glycosyl hydrolase, family 13, all-beta IPR006047 Glycosyl hydrolase, family 13, catalytic domain |
| Orthology group | MCL10148 |
Nucleotide sequence:
ATGATGCGTTTCATCCTTTTGCTGTGTGCCGTGTCTTTGGCTGTTGCGTACAAAAACCCG
CACTATGCCTCTGGACGTACCACAATGGTCCACTTGTTCGAGTGGAAGTGGGACGACATA
GCAGCTGAATGTGAAAGATTCCTAGGTCCAAGGGGATTTGGTGGTGTTCAGATTTCTCCA
CCCAATGAAAACCTTGCTATCTGGTCTCACAACCGGCCATGGTGGGAGAGATACCAGCCC
ATATCCTATCGTCTCGTAACCAGGTCTGGCAATGAACAACAGTTTTCGAATATGGTGCGA
AGATGCAACAATGCTGGTGTTCGGATTTATGTAGACGCGATCATTAATCACATGACTGGA
ACATGGAATGAGAACGTTGGAACCGGAGGCAGTACAGCCAACTTTGGTAACTGGCATTAT
CCTGGTGTTCCCTATGGCAGAAACGACTTCAACTGGCCTCAGTGCGTCATTAATGGCAAT
GATTACAGAAATAATGCAGCCAGAGTCCGCAACTGTGAGCTCTCAGGTTTGAAAGATTTG
AACCAGGGATCGGAATACGTCCGCACTCAAATTGTTAATTACATGAATCGCCTCATCGAC
TTGGGAGTTGCTGGATTCAGAATTGACGCCGCAAAACATATGTGGCCGAATGATCTGAGG
ATCATCTACGGCAGGCTAAAGAATCTTAACACCAGACATGGTTTCCCATCTGGTGCTCGT
CCCTACATCTATCAAGAAGTAATTGATCTCGGAGGAGAAGCTGTCAGACGTGATGAATAT
ACCCCTCTCGCTGCGGTAACTGAGTTCAAATATGGTATGGAGCTTAGCCGAGCTTTCTCT
GGTCGCAATCAACTTAGATGGTTGGTGAACTTTGGACCTCAATGGGGTATGTTGGGTTCT
TCAGACGATGCTCTTACTTTCATCGATAACCATGACAATCAAAGAGGTCATGGCGCTGGT
GGAAATATTCTGACCCACAAAACAGCTCGCAATTATAAGGGAGCCATTGGCTTTATGTTA
GCTCACCCATATGGACGACCACAGCTTATGAGCAGTTTTGGTTTCCATAATACTGAGGCT
GGACCACCAATGGACAACCGAGGCAATATTATTTCTCCATCCATCAATTCGGACAACAGT
TGTGGCAATGGCTGGATCTGCGAGCACAGATGGCGTCAGATCTATGCCATGGTTGCTTTC
CGTAACGTCGCTGGAAACACTCGTGTTTCTAATTGGTGGGACAACGGTAGCAACCAGATC
GCTTTCTGTCGAGGAGGACAAGCCTTTATAGCTTTCAACCGAGATGGCTGGGATTTGAAT
CAGAACTTACAGACTTGCCTCCCGGCGGGTAACTACTGTGACGTTATCTCCGGAGAGAAG
AGAAACAATCGTTGCACTGGCAAAACTATAACAGTCGGAGGTGACGGCCGCGCCCGTATT
CACGTTGGAGCCAACGACTACGACATGTTCCTTGCCATTCACAGGGGCAGCGAGAATATA
AAATCCCATGTTCCTGACAACACAGCAAGACCTCGGGTGACCGTAAGCGCATTCTGCCAG
CATTCAGAGCGGTACACCAGAAAATTAAGAGATGGATGGTCGTAG
Protein sequence:
MMRFILLLCAVSLAVAYKNPHYASGRTTMVHLFEWKWDDIAAECERFLGPRGFGGVQISP
PNENLAIWSHNRPWWERYQPISYRLVTRSGNEQQFSNMVRRCNNAGVRIYVDAIINHMTG
TWNENVGTGGSTANFGNWHYPGVPYGRNDFNWPQCVINGNDYRNNAARVRNCELSGLKDL
NQGSEYVRTQIVNYMNRLIDLGVAGFRIDAAKHMWPNDLRIIYGRLKNLNTRHGFPSGAR
PYIYQEVIDLGGEAVRRDEYTPLAAVTEFKYGMELSRAFSGRNQLRWLVNFGPQWGMLGS
SDDALTFIDNHDNQRGHGAGGNILTHKTARNYKGAIGFMLAHPYGRPQLMSSFGFHNTEA
GPPMDNRGNIISPSINSDNSCGNGWICEHRWRQIYAMVAFRNVAGNTRVSNWWDNGSNQI
AFCRGGQAFIAFNRDGWDLNQNLQTCLPAGNYCDVISGEKRNNRCTGKTITVGGDGRARI
HVGANDYDMFLAIHRGSENIKSHVPDNTARPRVTVSAFCQHSERYTRKLRDGWS