Genomic Position | scaffold11790:- 710-1639 |
---|---|
See gene structure | |
CDS Length | 930 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 0 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000058 (1e-26) |
Best Drosophila hit   | CG3238 (2e-17) |
Best Human hit | ATP-dependent DNA helicase PIF1 (1e-23) |
Best NR hit (blastp)   | PREDICTED: similar to helentron 3 helitron-like transposon replicase/helicase/endonuclease [Acyrthosiphon pisum] (1e-111) |
Best NR hit (blastx)   | PREDICTED: similar to helentron 3 helitron-like transposon replicase/helicase/endonuclease [Acyrthosiphon pisum] (9e-107) |
GeneOntology terms    | GO:0017111 nucleoside-triphosphatase activity GO:0000166 nucleotide binding GO:0004386 helicase activity GO:0004519 endonuclease activity GO:0005524 ATP binding |
InterPro families   | IPR010285 DNA helicase PIF1, ATP-dependent |
Orthology group | MCL10134 |
Nucleotide sequence:
ATGCAATTACCACCTGTACGAGGACATCAAGTCTTCCAACAACCAGAACATATGAAGCCT
GCCACACATCTGTGGCGGCAGTTTCGTCTGGTTGAACTTAAGCAAAACATGCGCCAACAA
GGAGATACAACGTTTATAGATGTGCTAAACGCCCTAAGAGTTGGAGCATTGACGTCTGAA
AACCTTGAGATCCTTCTCGGAAAAGTGTCGACAGATACATCTAACGAGTTCTCGATTGAG
AAAGCGTTAAGGATATATCCAACGAATGACCAAGTTGCTAGACATAACGAAAAGGTTCTC
CAGAGTTTTGAGGATAAAGGGACGGCTATTTATACGATAAAAGCACAAGATCAACTCATT
GATGCCACAAGAAATTTAGGTAATAAGGATTTAGATTCTGTGGTACCTAACGATATCAAT
AAAACAGGTCTTCCTAAAGTATTGAAAATATTCGTAGGTTCGAAAGTGATGCTAAGATCG
AACATTGACGTGTCAAAAGGTTTAGTTAATGGTAACATGGGTTTTATTACAGAAATTATC
TGGCCAAATTTTCGCAGGGGCCAAGTATATGCTGAAGATATTCCATCAGTTCGTATCGAT
TTTGATTCGGACGGAGTACACGTAATTAAACCAATGTCGATACAGTTCCCAGCAAAATAT
AGCTATGGAACTGTTGAGAGACGAATGTTGCCATTAATCCTGAGTTGGGCGTCGACCGTC
CACAAGATGCAAGGTTGTACAGTTGATCATGCAGTCATTTATTTGGGTCCGCGATTGTTT
GCTGCTGGACAAGCTTATGTAGCACTTAGTCGTGGGAGATCCTTGGACGGTATACGAATT
GAAGAACTTGATTGCTCAAAATTAACAGGAAAAACTCCATGGAACAGTGAAGCATTGAAT
GAAATGATTCGATTACGAGATAATCCATAA
Protein sequence:
MQLPPVRGHQVFQQPEHMKPATHLWRQFRLVELKQNMRQQGDTTFIDVLNALRVGALTSE
NLEILLGKVSTDTSNEFSIEKALRIYPTNDQVARHNEKVLQSFEDKGTAIYTIKAQDQLI
DATRNLGNKDLDSVVPNDINKTGLPKVLKIFVGSKVMLRSNIDVSKGLVNGNMGFITEII
WPNFRRGQVYAEDIPSVRIDFDSDGVHVIKPMSIQFPAKYSYGTVERRMLPLILSWASTV
HKMQGCTVDHAVIYLGPRLFAAGQAYVALSRGRSLDGIRIEELDCSKLTGKTPWNSEALN
EMIRLRDNP