| New model in OGS2.0 | DPOGS216023 |
|---|---|
| Genomic Position | scaffold257:+ 23178-26188 |
| See gene structure | |
| CDS Length | 1101 |
| Paired RNAseq reads | 1177 |
| Single RNAseq reads | 2686 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001093 (3e-169) |
| Best Drosophila hit | lipoic acid synthase (3e-144) |
| Best Human hit | lipoyl synthase, mitochondrial isoform 1 precursor (4e-121) |
| Best NR hit (blastp) | GE22745 [Drosophila yakuba] (6e-153) |
| Best NR hit (blastx) | GE22745 [Drosophila yakuba] (5e-150) |
| GeneOntology terms | GO:0009105 lipoic acid biosynthetic process GO:0017140 lipoic acid synthase activity GO:0005739 mitochondrion GO:0009107 lipoate biosynthetic process GO:0051539 4 iron, 4 sulfur cluster binding GO:0016992 lipoate synthase activity |
| InterPro families | IPR003698 Lipoate synthase IPR006638 Elongator protein 3/MiaB/NifB IPR013785 Aldolase-type TIM barrel IPR007197 Radical SAM |
| Orthology group | MCL13763 |
Nucleotide sequence:
ATGTTTCGAAATTCTCTTAAATCGTATTTGACCACAAGGGGTCACGAGTTCCAAAGATGT
AAACATACAAGCAAATTAGATCAAATAAGAGAAAAGTTAAGGGAAGGACCAGGTTTAGTA
GACTTTACATCTGAAGATAGGCCGAAAAATTGGGAGGATTATGAAGGGAAATTAAAAAGA
GAAAGAGGCCAGTCAGAAAGATTGAGGTTACCACCATGGTTGAAAACTACAATACCAACA
GGATCAAAATTCAGTGAGCTTAAAGCTCAATTACGTAGCCTGAATCTTAGCACAGTGTGT
GAGGAGGCTAGATGTCCAAATATAGGTGAATGTTGGAGTGGCGGTAAAAATGGAACATCT
ACTGCCACTATTATGTTAATGGGTGACACATGCACTCGTGGTTGTATGTTCTGTTCAGTG
AAGACATCCAGAGCGCCGCCTCCACTTGATCCCAATGAACCTGGCAACACTGCACGGGCA
ATAAACCAGTGGGGCCTAGGATATATAGTGCTCACTTCTGTCGATAGAGATGATTTACCT
GACGGAGGATCTGGACATTTTGCTGAAACAGTGAGGGAGATAAAATTACAAAATAGTGAA
ATCCTTGTTGAATGTCTAGTACCAGACTTTAGAGGGAATCGGGACTGTATTAACACTATT
GCTAACTGTGGCTTGGATGTGTTTGCGCACAATATAGAAACCGTGGAAAGACTCACACCA
TTTGTGAGAGATAAACGAGCAGGGTATCGACAAACATTGAGAGTTCTCAGCACAGCAAAG
GAGATTAATCCAGATTTAATTACAAAGTCATCTATCATGTTGGGTCTTGGTGAAACTGAC
CAAGAAGTGGAACAAACTATGAAAGATCTCAGATCGTCGGGTGTAGATTGTGTAACATTG
GGCCAATATATGCAGCCAACCAAGCGCCATCTCAAAGTACACGAATATGTGACACCGGCC
AAATTCAAAGAATGGGAAGAGTTGGGCCAACAGCTAGGCTTCCTGTACACAGCTAGTGGC
CCACTTGTACGTTCGTCTTATAGGGCTGGGGAGTTCTTCATATCGAGTTTGTTGAGAGAC
AGAAAAGCTAATAGTGCTTGA
Protein sequence:
MFRNSLKSYLTTRGHEFQRCKHTSKLDQIREKLREGPGLVDFTSEDRPKNWEDYEGKLKR
ERGQSERLRLPPWLKTTIPTGSKFSELKAQLRSLNLSTVCEEARCPNIGECWSGGKNGTS
TATIMLMGDTCTRGCMFCSVKTSRAPPPLDPNEPGNTARAINQWGLGYIVLTSVDRDDLP
DGGSGHFAETVREIKLQNSEILVECLVPDFRGNRDCINTIANCGLDVFAHNIETVERLTP
FVRDKRAGYRQTLRVLSTAKEINPDLITKSSIMLGLGETDQEVEQTMKDLRSSGVDCVTL
GQYMQPTKRHLKVHEYVTPAKFKEWEELGQQLGFLYTASGPLVRSSYRAGEFFISSLLRD
RKANSA